LOCUS       JO260036                1300 bp    mRNA    linear   TSA 11-JAN-2012
DEFINITION  TSA: Klebsormidium flaccidum strain UTEX 321 kfla_c13915_c mRNA
            sequence.
ACCESSION   JO260036
VERSION     JO260036.1
DBLINK      BioProject: PRJNA51159
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Klebsormidium flaccidum
  ORGANISM  Klebsormidium flaccidum
            Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae;
            Klebsormidiales; Klebsormidiaceae; Klebsormidium.
REFERENCE   1  (bases 1 to 1300)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 1300)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1300
                     /organism="Klebsormidium flaccidum"
                     /mol_type="mRNA"
                     /strain="UTEX 321"
                     /culture_collection="UTEX:321"
                     /db_xref="taxon:3175"
BASE COUNT          313 a          396 c          291 g          300 t
ORIGIN      
        1 ccgtacgtgt aacaagatag actcactggg cttcacacgc gttctaactt ctgacccgct
       61 aatgcacgcc aactgctgtt gcatttacga cgacgcaata tgacgcaata aagaggcctt
      121 caaatgtcgt catgatcctc cttgatccga gccccggtta agcaacgatc ccctcaacga
      181 gcataactca tcctatcaaa cactctgctt tgggctttca agtcccccgc acggagagaa
      241 atgcgaagcc cctcgctaat ctatgctcta gctgcgtatg ctttgctagc gctctacact
      301 gcagcggcgg cgagccccct ataaactcaa cttcgtacga caacctcctc tgatattccg
      361 gtcttcttga ataaatagca atctaggatt gaccgtcaag agggcacttg tcggtggact
      421 cttttgacaa cctgcagaaa tgacattcgg cggtattgta acggccaaag aaaaactggc
      481 aacgtgtaat cctcgtgttg ctccacaaaa gatatcatgc gtgacagacg ccttctcagg
      541 gatgcacttc cgaaggacgc ctccatgaga cttccttcga tcacgaacct taaaatcgga
      601 tcacaaccgg ggaagcagaa gagcaagctc gacgaataag cgagaatccg tagcgaagaa
      661 gatcttttat ctccgcagac cacagacgtt cgttttcaca gtgctgtgga gtgctcattg
      721 catgggtgac gacttcgcct tcagcgttgc tggtccctct ttacgacctc cgttggggct
      781 aagaatctcc gtcaaggcga actactctcc gcaagacgga cagcttggct tctcgactgt
      841 ccaacggagg gaaccatttt ccactcggct cacactgtat ccgtctggtg ttcctcaata
      901 cgcttcgaaa cacatcggac tcgttcaaac ggtcgagtaa ccagacacgc tattggctta
      961 aggcaagcca agaagctcgg gtttcagaca ccggcaaagc agcgtttgca ttccaaccta
     1021 accagatttg acaccagcca atcccggtct tacaaaccaa tcggaacaga ttccatcgcc
     1081 cctcaccttc ttttcccgcc caaaaatgtc ctcacacctc ctctgcagcg ggcacttggt
     1141 agcccttagg ggaccgcccc gctccattcc caggggaagc cagcggtgcg tcatatttgg
     1201 cggaagaata cttcttggac gcgttctgcg cttccagctg gcgcctcatt agctctagct
     1261 ccgccgcctg gcccgtctcc catcaccgcc ttgggtcccg
//