LOCUS       JO258586                1149 bp    mRNA    linear   TSA 11-JAN-2012
DEFINITION  TSA: Klebsormidium flaccidum strain UTEX 321 kfla_c11495_c mRNA
            sequence.
ACCESSION   JO258586
VERSION     JO258586.1
DBLINK      BioProject: PRJNA51159
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Klebsormidium flaccidum
  ORGANISM  Klebsormidium flaccidum
            Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae;
            Klebsormidiales; Klebsormidiaceae; Klebsormidium.
REFERENCE   1  (bases 1 to 1149)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 1149)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1149
                     /organism="Klebsormidium flaccidum"
                     /mol_type="mRNA"
                     /strain="UTEX 321"
                     /culture_collection="UTEX:321"
                     /db_xref="taxon:3175"
BASE COUNT          289 a          234 c          305 g          320 t
ORIGIN      
        1 atatatcgtt tgtttcttga attgttcttc aatttggagt gaaattcaga gttcttgact
       61 tgagtgcgtg aggggatagg tgatactaga aatgaattgg atggatgaag gtatagctga
      121 tacaagaggc tttgaaacgc ctttgagttc aggtctatat ctgaggcgtc tttgttcatt
      181 tgaggccctt ctatcgtctt caaacatcga aactgtccac cagaagtgga acttttgtgg
      241 tacatttggt agacagatct tgtcctgcgg tgatcatgta agagctggca cttttaatcc
      301 ttctgtacaa gttcatgaca actgaagtct caaatgggtt tttctgctca gggtttaagg
      361 gatatcacgc cattctggtc tggttgattt gttttgggtc ccggaaacga tgcctaaggc
      421 taagagaagg cttcaaccag gcctaaggtt aaaagaaggc cgaggtcctt aggctaagag
      481 aaggcctcaa ccagccggtg gccattgatt gcgtgcttga tatcagtttg tttgaatcga
      541 ccagaatcac aagtcgcatg caaggtctta caaccttcag ctacatattt cgcaggactt
      601 cttcaatcca gcagcctctc atcctccctg tttggttcgt gcctgccgtt gtgtccttca
      661 acctggcttg gagcattccc ggaggcagcg tccttgccaa gctggccacg gctgttgggg
      721 ggccctttga gcgccatcct cagcgtgttg gtgagcaaga agttcaaccc ggatcctgtt
      781 gaggtgctca aggagcggct gactcggctg gagaagaagc aggatctgga gaaggatgtg
      841 tacagtcagg tgttcgaact catctacagt gacgcgaagg cacgcgagga gctgcttttc
      901 ttttcaaaat ttagcaaaga cgacgaggag ttccggttag cctgtaaagt cttcgtgagc
      961 aacaggtcga gtgactaaca aagagtgcac aatcacggga aaaaagacag tgtccgctac
     1021 atatatctrt tcaatgatga tggggtgaca tctaaatgtg ctacgttttg tgcaagttta
     1081 ccataagtta gtggaagtgt acaatgagca cgtgtatagt agatcgtgga ttcgaacggt
     1141 aaaacaagc
//