LOCUS       JO239967                 657 bp    mRNA    linear   TSA 11-JAN-2012
DEFINITION  TSA: Coleochaete sp. CFD corb_UMD_Coleochaete_c13695_c_s mRNA
            sequence.
ACCESSION   JO239967
VERSION     JO239967.1
DBLINK      BioProject: PRJNA51149
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Coleochaete sp. CFD
  ORGANISM  Coleochaete sp. CFD
            Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
            Coleochaetales; Coleochaetaceae; Coleochaete.
REFERENCE   1  (bases 1 to 657)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 657)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Coleochaete sp. CFD"
                     /mol_type="mRNA"
                     /strain="CFD"
                     /db_xref="taxon:1068959"
BASE COUNT          147 a          184 c          172 g          145 t
ORIGIN      
        1 attcccggga ggcaaaccca gacattgtct cacagcttac ggacatgggc ttcccacaga
       61 atcgctgcga gaaggcagct attctaacag aaaatgcagg caccgrrryt scsrkgawct
      121 ggctcttcgc ccatatggag gatccagata ttgacgagcc ggtggccccc aaggagccag
      181 ccaggggagc agcgccacct gttgatgaaa gcgccgtgga gatgtgctgt gctctcgggt
      241 tctccgctga tgtggcgcgc cacgccttga aaaatactgg taataacatc gagatggcgg
      301 tagagtggat tctgtcgcac ccttcagagg tgaatggcat ggacgttgac cagccaggtg
      361 gcggcacggc agtagctcct ccacccccac ggcccattcc agatggccct ggaaagtaca
      421 agctgattgc atttgtgagt catatgggga catccacaca gtgcgggcat tacgtgtgcc
      481 acgctttcaa ggatggacgc tgggtcatct tcaacgattc caaagtcgct gtctctgaca
      541 ccccgcccaa agagttgggc tatctctact tttggcgacg agtcttgcct tgatcccttc
      601 tgtgctacac cttggcaatc aaaaccattc attatagacc aagctctctc tctctct
//