LOCUS       JO239754                1150 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Coleochaete sp. CFD corb_UMD_Coleochaete_c13371_c_s mRNA
            sequence.
ACCESSION   JO239754
VERSION     JO239754.1
DBLINK      BioProject: PRJNA51149
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Coleochaete sp. CFD
  ORGANISM  Coleochaete sp. CFD
            Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
            Coleochaetales; Coleochaetaceae; Coleochaete.
REFERENCE   1  (bases 1 to 1150)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1150)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Coleochaete sp. CFD"
                     /mol_type="mRNA"
                     /strain="CFD"
                     /db_xref="taxon:1068959"
BASE COUNT          299 a          213 c          314 g          324 t
ORIGIN      
        1 tgggagagga acaaaaaacc tgttgcttag aagggcgaca gtgagggggc ttccgttttg
       61 gggaaaagaa gaaagcaaag gaggaggcac cggagactaa gtttacccaa agctgactct
      121 gagcagcttg cagctacaga aactgagacc gagccagagg ggctcgtcac ggaaactaag
      181 cccgaggagg aaggaaagga gaaaagataa agggattggc ttgagggtcg acagtgttgt
      241 cgacaagatt ttgagctccg tggttttgca tggctgttgt taaagtgaga gtcttgtggc
      301 gtatgcatgg tggtcaaaga gagaaagtgg atggaatgga ccgattcatt gtggccatgt
      361 atggcctgca aagccttatt ttttatgcgc agaattattg tagtaatagc attgaaatgc
      421 aatcgctctc atatagataa aatctgcagc aggtcttttc tgtgagatag atacgtggtc
      481 gtcagtgtgt cccagcctac gtcacgccca cgcatgaaag acagctttca caagcccctt
      541 ggcagttccg atgtttttat cttgtccgcg cacaagggat acgaaatcgg ggagaaatta
      601 cagagggcga cctcaccttg atggaaagaa ttgcttgcag attggttgat aggtaatgta
      661 tctcttattt gtaccttata ttttttcgta gacattttgt tcctcggagg gtcgaggaca
      721 aggtcaatta tcttcttgac ctggtgaacg agctcggaat gagagagtcc gaatgtgccc
      781 atgtattgat gtgcttggtt tgaatcattc ctctcgctct ttaatgcgag tctagagggg
      841 cagacccgtg gaagtcaagt ctagtcctgc atgtgcaaat gttgctggag tatgtcgccg
      901 tttctgactt cagcttcgtg ttggttgcta tacatgctag gacttttaat ttaaacagat
      961 gttagtttat tatgtgtagt ggatccatga aaatcctaca tggatgcgat ggaaccatat
     1021 tgacacacat gtcaattaac ttgtttgcat gttggttctc ggccaaggcc tttttgcatg
     1081 tgggccaagg ccatctggaa cgaattttgt acatgcacat gcgacattgc ttgtctatgg
     1141 ttgttgacac
//