LOCUS       JO239036                1215 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Coleochaete sp. CFD corb_UMD_Coleochaete_c12241_c_s mRNA
            sequence.
ACCESSION   JO239036
VERSION     JO239036.1
DBLINK      BioProject: PRJNA51149
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Coleochaete sp. CFD
  ORGANISM  Coleochaete sp. CFD
            Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
            Coleochaetales; Coleochaetaceae; Coleochaete.
REFERENCE   1  (bases 1 to 1215)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1215)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1215
                     /organism="Coleochaete sp. CFD"
                     /mol_type="mRNA"
                     /strain="CFD"
                     /db_xref="taxon:1068959"
BASE COUNT          246 a          362 c          376 g          231 t
ORIGIN      
        1 catctgtgtc tactgccctg ggggccccga ctcggacttt gagtacagca cacagtccta
       61 caccggctac gagccgacga gcatgagagc catccgcgcc aggtacgatc cgtacgtgca
      121 ggctcgggga aggatcgacc agctgcggcg cctcgggcac agcgttgata aggttgagta
      181 catcctgatg gggggaacgt tcatgtcact gcccacggat taccgcgact actttgtgcg
      241 gaacctccac gacgcgctgt cagggcagac atcgcgtgat gttgatgagg ctgtcccggg
      301 aggcgagcac ggcactgtga agtgcatcgg cctcaccatc gagacgaggc ccgactattg
      361 tcaggcagtg cacctgcgcc agatgctgtc atacggttgc acgcgccttg agatcggtgt
      421 gcaaagcacc tacgaggacg tcgcccgaga cacgaaccgc ggccacaccg tagctgccgt
      481 cgccgattgc ttctgcctcg caaaagatgc cggcttcaag gtggttgcgc acatgatgcc
      541 ggatttgccg aacgtgggga tggagcgcga catggagagc ttctacgagt tctttgagag
      601 ccccacgttc cgacccgacg gcctcaagct ctaccccacg ctcgtcatcc gtggcaccgg
      661 actctacgaa ctctggaaga ccggcgggta ccgaaactat gctccggaca agctggtgga
      721 cctggtggcc cgtctgctgg cactcgtacc gccttggact cgtgtgtacc ggatccagcg
      781 cgacatcccc atgccgcttg tttcgtccgg ggtcgaaaag gggaatctac gcgagcttgc
      841 gctcgcgcgc atgcaagacc tcggcctacg ctgccgcgat gtccgcaccc gggaagccgg
      901 cattcaggac atccacttga agatccgccc cgaggctgta gagctgataa ggagagacta
      961 cgcagctagt ggtagctggg agacgttcct tgcctacgaa gacaccagac aggacattct
     1021 ggtggggctt cttcgcttgc gtaagtgtgg tccgaacacg acgtgtcgag agcttgttgg
     1081 ccgatgctca attgtacgtg agcttcacgt ctacggcacc gccgtcgcca tccatgcccg
     1141 ggacgaggac aagctccagc accagggtta tggcacgttg ttaatggagg aagcagagag
     1201 gatcgctgtg agaga
//