LOCUS       JO238622                 798 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Coleochaete sp. CFD corb_UMD_Coleochaete_c11553_c_s mRNA
            sequence.
ACCESSION   JO238622
VERSION     JO238622.1
DBLINK      BioProject: PRJNA51149
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Coleochaete sp. CFD
  ORGANISM  Coleochaete sp. CFD
            Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
            Coleochaetales; Coleochaetaceae; Coleochaete.
REFERENCE   1  (bases 1 to 798)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 798)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..798
                     /organism="Coleochaete sp. CFD"
                     /mol_type="mRNA"
                     /strain="CFD"
                     /db_xref="taxon:1068959"
BASE COUNT          214 a          188 c          222 g          170 t
ORIGIN      
        1 tcccactgct ggtatcctgg ctgtcagtct cgcatgaatc tgtagctggc acgggtagtt
       61 ttctgctctt gtatattggc ttgaagtccg tgctggtaag ctggaaacaa tggctacacc
      121 agcagctgag acaaatggca aagggttgaa ctcactcact gggctggaga acagtctcag
      181 agagactctt aaaaaggagg cgcaagatgc agagaagagg cagaaggcgg ttgagattca
      241 gaagcaagca tgggaccaga ccaggcaggt catgtctgtc ccaaaggagt tggagattgg
      301 ggcagacagt cgaaaggaag atcaggccaa tgcggtggtg cmgrsagtgg cggccaaaga
      361 ggaggtgatt aataggaaga agcaagagat gcagggcaag gtccatgccc accttacgcg
      421 catcaaccag gaggcaaagc gactggacga ccttggcaag gaaatcgctg cattggggga
      481 ccccacaaag agagagagag agagaatcca agtccgacga tgcatgcggt gtttgtcgag
      541 cttgagcatg tatgcatttg ctcttcaccc ttaaattgtg ttccactctc ataatggttg
      601 gcgaaaactt cggaaatccc tgcattccac gggagccacg tgtacttaca agtcccccgc
      661 actacctkca gtccaagcag atttaatgat ctggttgacc agaagcggca agaagcagca
      721 agtttcccac ttgccagttt ctgtacccgg tggtatacac catttcaaaa aggcgctctc
      781 tctctctctc tctctctc
//