LOCUS       JO230931                 943 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Penium margaritaceum pmar_71836_c43318_c mRNA sequence.
ACCESSION   JO230931
VERSION     JO230931.1
DBLINK      BioProject: PRJNA68813
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Penium margaritaceum
  ORGANISM  Penium margaritaceum
            Eukaryota; Viridiplantae; Streptophyta; Zygnematophyceae;
            Zygnematophycidae; Desmidiales; Peniaceae; Penium.
REFERENCE   1  (bases 1 to 943)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 943)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..943
                     /organism="Penium margaritaceum"
                     /mol_type="mRNA"
                     /strain="SKD2004_CL18"
                     /db_xref="taxon:102169"
BASE COUNT          202 a          268 c          263 g          210 t
ORIGIN      
        1 tctcttttct atccctggac ataacagata cttggcgtca cactgagatt gctacatgct
       61 gcagaatgtg tagttcacgg tcttccaagg cgaggcacct tttgttgaga atgcagcaat
      121 tcctgctctg caggacaagc tttcaggtag gcaacacggt gtaacagaac actgtcaatc
      181 ttgccgctat cgttgtacgg aggatgagga ggctcttgcc tgcgcccgtg gaatcatcga
      241 gctacgttaa agccgtttta gaacacacgg caaagcgtcc tggcagagcc gcacgcagat
      301 gctgcggatg ctacagcaac cacagcacca tgcgcagctt gcgaggcatg caaagcttcc
      361 gcaagcacca catcttcgtg gcgtttgctc aatcgggtga ggaaagcaca gtaggccgcg
      421 ggcacccatg cgaagcaccc gcgagcgtgc cacatattcg tggcgcttgc tctatcgggt
      481 catggaaaca ggcccgcgaa ttctactggc accgacgccg tgctgggaag cgcgtctgtt
      541 ggcgctgccc ttggcagaca cgaaggagcc ccttgcggag tcgcaggaat gaagaacagc
      601 tacgagcgcc acttcatgtt gaccttccgc acaacggtgc tctcaaccta ctagctcata
      661 ggagaagtcg cattattgtt gttgttgttg ttggggccag gaccttgcgg ggaagccagg
      721 ctgttgttgc tgctcctcac agaagacacg gcactgagaa ggccgctgaa gaggttgccg
      781 ctcgcccaac tgcccgccag actctttcgg ccgaagccgc cgttgccttg ccgcatcatc
      841 gcgacgaatt cgttgtagtc gattatgccg tcctggttcg tgtccacgtc tcgcatagtg
      901 tcgatgatgc atgtgtcatc gatgccgtac tcacgacacg cct
//