LOCUS       JO216023                 459 bp    mRNA    linear   TSA 11-JAN-2012
DEFINITION  TSA: Penium margaritaceum pmar_71836_c10992_c mRNA sequence.
ACCESSION   JO216023
VERSION     JO216023.1
DBLINK      BioProject: PRJNA68813
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Penium margaritaceum
  ORGANISM  Penium margaritaceum
            Eukaryota; Viridiplantae; Streptophyta; Zygnematophyceae;
            Zygnematophycidae; Desmidiales; Peniaceae; Penium.
REFERENCE   1  (bases 1 to 459)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 459)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Penium margaritaceum"
                     /mol_type="mRNA"
                     /strain="SKD2004_CL18"
                     /db_xref="taxon:102169"
BASE COUNT           86 a          131 c          171 g           71 t
ORIGIN      
        1 gtggagtagg tgcgaaaccg gcggtagggg aggaagggcg gcctgacgcg tatggagacg
       61 cacaggcagc gtcagctgat gaggaggagg tgtttgagga cgccatgacg gtagagcaac
      121 agtggaagac agcgctagcg cgggcagaag cactgaagca agagggcaac gtgtgctacg
      181 gacgaggcga ctacgccggc gccgcgcagc tctactcgcg cagcctcgaa gagtgtcctg
      241 ccgtgccgcc tccgcctccg cctccgtctg tttctcctcc ctctgccgcc agcgctgctg
      301 ctgctgggcc tgcttctgag gcgcggacca tggacgcagc ggatggctca ggagaaccag
      361 ctgcagctgc tgcggatgtg ggagcatcag cagcagctgc aggagaaccg gcggcggctg
      421 ctgtcggtgc agatgcttcg acgcaagcgg ctgacgttg
//