LOCUS       JO215988                 606 bp    mRNA    linear   TSA 11-JAN-2012
DEFINITION  TSA: Penium margaritaceum pmar_71836_c10937_c mRNA sequence.
ACCESSION   JO215988
VERSION     JO215988.1
DBLINK      BioProject: PRJNA68813
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Penium margaritaceum
  ORGANISM  Penium margaritaceum
            Eukaryota; Viridiplantae; Streptophyta; Zygnematophyceae;
            Zygnematophycidae; Desmidiales; Peniaceae; Penium.
REFERENCE   1  (bases 1 to 606)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 606)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Penium margaritaceum"
                     /mol_type="mRNA"
                     /strain="SKD2004_CL18"
                     /db_xref="taxon:102169"
BASE COUNT          180 a          134 c          205 g           87 t
ORIGIN      
        1 cgggagagga aagcagagca gaagaagcag gcggagcaaa agaagcaagc agagcaaaag
       61 aagcaagctg aactgaagag acaacaagcg cagaagaagc tggcggagga gaagaagaag
      121 gaagagcaga agaaggcaga gcagaggaag caggcagaac tgaggaagaa gcaggcgcag
      181 caacagcagc aggggcagca gaatcagcac aaggcgcaga ctgggcgcca cctgcttcag
      241 acaggaacag tgatgaggac gggatgggtg tttggtttcc gatgtcgcga caaccgtgat
      301 aactacatgt ggtgggacct gcgcaacccg acgagccgcc tgcactacct cctctttagg
      361 tctgcatggc agggagcatc tgtggagatt gagcccaaga cactgcttca gctcaagagc
      421 gtgtgaggca cgcctgcact ggactgcact ggactgcact gctggtgcag aggtgcaggt
      481 tcaaatccgt gctgcgcaga taaacctgtg atttgccctg agctggaaag acgtcacctg
      541 gagagcatgg aatgcggcac tggaaaaaag ctgacgatgc cagtgctgtt gatggcgatg
      601 tgctgt
//