LOCUS       JO202001                 450 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Chlorokybus atmophyticus strain UTEX 2591 chatm_c12825_c_s
            mRNA sequence.
ACCESSION   JO202001
VERSION     JO202001.1
DBLINK      BioProject: PRJNA51157
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Chlorokybus atmophyticus
  ORGANISM  Chlorokybus atmophyticus
            Eukaryota; Viridiplantae; Streptophyta; Chlorokybophyceae;
            Chlorokybales; Chlorokybaceae; Chlorokybus.
REFERENCE   1  (bases 1 to 450)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 450)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Chlorokybus atmophyticus"
                     /mol_type="mRNA"
                     /strain="UTEX 2591"
                     /culture_collection="UTEX:2591"
                     /db_xref="taxon:3144"
BASE COUNT           98 a          131 c          134 g           87 t
ORIGIN      
        1 agcgagtacg ccacgtggct cgctggcagc cgagcactgc agcctgttgt tcctcctcta
       61 accaaaatag cagtcacaaa gcctcaacag cacagccgaa ttccgccgag ctcgagtgcg
      121 gtataggccg gagaggcgcg cttgctgcag cagccgcatt ggcgatatca gtctccgcat
      181 caacgatatc tccatcgtcg gctgctgctg cggttgcaat cggtgatgga cgcagcgtgc
      241 tgcagcgcgt gttcggcatg ggggcgtccg atctgtatta cccagagttc ttcaatggta
      301 cgtgggagtg cgtgtcgacg ctggtaacaa tagaaacgcc gcagggcgaa gacaagatgg
      361 acgcgaacag ccttgcgcga gcccgccgac aactgaacac ttcggtcaag tacatgacgc
      421 ggttcttccc tcgtgaaggg cacatcatcg
//