LOCUS       JO201488                 689 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Chlorokybus atmophyticus strain UTEX 2591 chatm_c11740_c_s
            mRNA sequence.
ACCESSION   JO201488
VERSION     JO201488.1
DBLINK      BioProject: PRJNA51157
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Chlorokybus atmophyticus
  ORGANISM  Chlorokybus atmophyticus
            Eukaryota; Viridiplantae; Streptophyta; Chlorokybophyceae;
            Chlorokybales; Chlorokybaceae; Chlorokybus.
REFERENCE   1  (bases 1 to 689)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 689)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..689
                     /organism="Chlorokybus atmophyticus"
                     /mol_type="mRNA"
                     /strain="UTEX 2591"
                     /culture_collection="UTEX:2591"
                     /db_xref="taxon:3144"
BASE COUNT          165 a          202 c          189 g          133 t
ORIGIN      
        1 ccatatgcaa acagacgagc aaatcaagga gagcaagcaa agctgtgttt gctaaccctg
       61 aattagtcta catagccttg cacagtacag ctgctgctga tactggtgct tacacattca
      121 cactcattgt caaaagaaca acccaaaaac aaaacagcaa tacacacccc atgtctcata
      181 caccgccttt cacgtggttg gcgagtgtag ccatatgtgg tctctgagtc gctgcacgtt
      241 gctgccatat atttcatcga ccttgcggcc gttgcggtag aacgcgaacg tgggcgtgaa
      301 gcggatgtcc gcggaggtgc gaggcacgcg gtccacgtcc gccacaacaa acagagtttc
      361 cacgaattgc ccgctcagac gaacaaacgc cgggatcatg cccttgcagt ggtcgcacca
      421 ggaagcgccg tagtcgacaa caaccgtcct tgccggtccc gccgtcgcca gtatgtcagc
      481 caggtcctcg tcggatcctg ccccggtgta gttgggacgc gtctggggcg ggacgtacgc
      541 cttcttggcc gggtgcgggg ctgcccctga ccccaaagca cgccgccgag gaggacgaga
      601 cgcgtccatc acgacgacgc cagggttgac tgaccgaccc tcaatacaat acaaccgttg
      661 atgggactag gggggaagtt ttgaatatg
//