LOCUS       JO178782                 447 bp    mRNA    linear   TSA 11-JAN-2012
DEFINITION  TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c33747_c_s
            mRNA sequence.
ACCESSION   JO178782
VERSION     JO178782.1
DBLINK      BioProject: PRJNA51161
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Chaetosphaeridium globosum
  ORGANISM  Chaetosphaeridium globosum
            Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
            Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium.
REFERENCE   1  (bases 1 to 447)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 447)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Chaetosphaeridium globosum"
                     /mol_type="mRNA"
                     /strain="SAG 26.98"
                     /culture_collection="SAG:26.98"
                     /db_xref="taxon:96477"
BASE COUNT           78 a          119 c          133 g          116 t
ORIGIN      
        1 tgcactaggt ccttgatttg tgggcgggag tagggtgttg ctggcctctg agggtggggt
       61 tcaaataggg tgttgccgct taaaagtgag ccaaggccat ggtgggtggg agagttgagc
      121 cgttccatta cttggtggaa cgtgagaagc gttgcttgcc tgaaagtgag ccaccaggac
      181 caagatgcac tcggccgggt ttctttgaca aaaggtgcta gagggtcgtg ctcaagggtc
      241 atgcacttgg ctttgtggag ataggcacca tcgtcaccat ggtcacgcgt atggttgggt
      301 cagcttgacg ggccggatag caggatgaca tttgctacgg ccatggtacc caattcctcg
      361 ttgggttttt cggtccactc acactcttct tgctccctct ctctcgaacc gacccgcccc
      421 cccnccccct cctctcctct cctctct
//