LOCUS       JO168091                 628 bp    mRNA    linear   TSA 11-JAN-2012
DEFINITION  TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c12489_c_s
            mRNA sequence.
ACCESSION   JO168091
VERSION     JO168091.1
DBLINK      BioProject: PRJNA51161
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Chaetosphaeridium globosum
  ORGANISM  Chaetosphaeridium globosum
            Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
            Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium.
REFERENCE   1  (bases 1 to 628)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 628)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Chaetosphaeridium globosum"
                     /mol_type="mRNA"
                     /strain="SAG 26.98"
                     /culture_collection="SAG:26.98"
                     /db_xref="taxon:96477"
BASE COUNT          236 a          108 c          140 g          143 t
ORIGIN      
        1 tcaattctat aatgaggaaa ggcacgaaaa gaagaagaga atttgttcca attgttattt
       61 aaagctgtcc aaggcatgcg aaagcctcca caataagcaa cgaacaaggc tcatcagcaa
      121 tgaactgtac cgatccgaac acaaccaatc aaattagtgt cgttgtgaaa ccgagtccca
      181 ttggcggaaa tggtcttttt gcactacgag attttgtcaa aggagaagtc gtkgcacggt
      241 acggaggaag aatactatca ctgaaagaaa cagaaggaaa ggatcctagc tatatgagag
      301 ttatcggtct ggataaaaac aatggcgtta ttgatggcaa atatggtttc ggaagctctc
      361 ttggacggta tatcaactct ccaccaaagg gaaaatatcc aaattgcaag tggggcaaat
      421 atagtgaaac aaccaaaact attacaatca acaccaacaa agcagtcaaa cgaggagaag
      481 agttcatgat aagatatgga ttccaagtag atagaatgtt gaggcaataa aaagatgtgg
      541 aagacctatg caaagtagtc agcagattgg tgctatccaa taatgtttac gtgacatgct
      601 aacttgtcga cgataataaa tagaaaag
//