LOCUS       JO167604                 488 bp    mRNA    linear   TSA 11-JAN-2012
DEFINITION  TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c11669_c_s
            mRNA sequence.
ACCESSION   JO167604
VERSION     JO167604.1
DBLINK      BioProject: PRJNA51161
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Chaetosphaeridium globosum
  ORGANISM  Chaetosphaeridium globosum
            Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
            Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium.
REFERENCE   1  (bases 1 to 488)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 488)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Chaetosphaeridium globosum"
                     /mol_type="mRNA"
                     /strain="SAG 26.98"
                     /culture_collection="SAG:26.98"
                     /db_xref="taxon:96477"
BASE COUNT           96 a          117 c          126 g          149 t
ORIGIN      
        1 gaggtgagtc ccttcgtatg cattggttgt gtcctctcac tccatccatt ggcataaggg
       61 agcttctaca tgtccagaac gcacaagagg atggccaccg gctttcatca tacataccgc
      121 ctactttctt gtccatcttg gagaacaacg aggtggttgc ccgtcttctt tggggcaaat
      181 gccttgattc cgcagagtct tctctgaaag gggtgcttga gtaccgggaa caggttggct
      241 ttcttggctt ttggttgtgt ttgccttcct cagtataagg agcgctcacg tttcgattgc
      301 gctgtgcttg tatagatctc cggtgttttc cacccactct atgcggtgag cgagcacaat
      361 cttggagtag ttctccttaa aactcagaag atgttcccga atggagctcg acatcttgga
      421 tttgaccttc ttttctctgc actgagaaag cttcaacatg taaggtggct gtgatggtga
      481 tgggccgc
//