LOCUS       JN873227                1788 bp    DNA     linear   PLN 21-AUG-2012
DEFINITION  Saccharina japonica isolate TYPF-1 cytochrome c oxidase subunit 1
            (COI) gene, complete cds; mitochondrial.
ACCESSION   JN873227
VERSION     JN873227.1
KEYWORDS    .
SOURCE      mitochondrion Saccharina japonica
  ORGANISM  Saccharina japonica
            Eukaryota; Sar; Stramenopiles; Ochrophyta; PX clade; Phaeophyceae;
            Laminariales; Laminariaceae; Saccharina.
REFERENCE   1  (bases 1 to 1788)
  AUTHORS   Balakirev,E.S., Krupnova,T.N. and Ayala,F.J.
  TITLE     DNA variation in the phenotypically-diverse brown alga Saccharina
            japonica
  JOURNAL   BMC Plant Biol. 12 (1), 108 (2012)
   PUBMED   22784095
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1788)
  AUTHORS   Balakirev,E.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2011) Department of Ecology and Evolutionary
            Biology, University of California, Irvine, 321 Steinhaus Hall,
            Irvine, CA 92697-2525, USA
FEATURES             Location/Qualifiers
     source          1..1788
                     /organism="Saccharina japonica"
                     /organelle="mitochondrion"
                     /mol_type="genomic DNA"
                     /isolate="TYPF-1"
                     /db_xref="taxon:88149"
     gene            109..1710
                     /gene="COI"
     CDS             109..1710
                     /gene="COI"
                     /codon_start=1
                     /product="cytochrome c oxidase subunit 1"
                     /protein_id="AFC37376.1"
                     /translation="MSFTTHSKPLSQLWSPSVISSSLSGFSSRWLFSTNHKDIGTLYL
                     IFGGFSGVLGTAMSVLIRLQLASPGNQFLGGNHQLYNVIVTAHAFLMIFFMVMPILIG
                     GFGNWFVPLMIGAPDMAFPRMNNISFWLLPPSLILLLASSLVESGAGTGWTVYPPLSG
                     IQAHSGPSVDLAIFSLHLSGAASILGAINFITTIFNMRAPGMTMDRLPLFVWSVLITA
                     FLLLLSLPVLAGGITMLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPG
                     FGIVSHILSTFARKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT
                     MIIAVPTGIKIFSWIATLWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIAL
                     HDTYYVVAHFHYVLSMGAAFTMFAAFYFWIGKMTGLAYPEILGQIHFWLMFLGVNLTF
                     FPMHFLGLAGMPRRIPDYPDSYAGWNGLASFGSILSSIASLFFFFVVYITLTRGSVEE
                     SNPWVKGRGLAFPVLPRRSSKVGNK"
BASE COUNT          414 a          286 c          359 g          729 t
ORIGIN      
        1 ttctagtgtt aagcggcttt actattatct tttttatgct tagcccgaat attttttatc
       61 tattaacata caaggtagga ctaggtctta tgttttaata attagctaat gtcttttact
      121 acacattcta aacctttatc gcaattatgg tctccatcgg ttattagctc gtcattgagt
      181 ggtttctctt ctaggtggtt attttccacc aaccataaag atattggtac attgtattta
      241 atctttggag gtttttcagg tgttcttgga acagcaatgt ctgttcttat tcgtttgcaa
      301 ttggccagtc ctggaaatca atttttaggg ggtaatcacc aattatacaa tgttattgta
      361 actgcgcatg ctttcttaat gatttttttt atggttatgc caattcttat tggtgggttt
      421 ggaaattggt ttgtaccttt aatgattggt gctcctgata tggcttttcc ccgtatgaat
      481 aacattagtt tttggttact acctccctct ttaattttgc ttctagcatc ctcgttggta
      541 gaatctggag ctggtacagg ttggacagtg tacccacctc ttagtggtat tcaggcacac
      601 tcaggacctt ctgttgactt agctatattt agtcttcatc tttcgggtgc tgcttctatt
      661 ttaggggcta taaactttat tacaacaatt tttaatatga gagcacccgg tatgacgatg
      721 gatagattgc ccctttttgt atggtctgtc ttaataacag cgttcttatt actgttatca
      781 cttcctgttt tagcaggtgg tattacaatg ctattaacag ataggaattt taatactact
      841 ttttttgatc cggccggtgg tggtgatccg gtattgtatc agcatttatt ttggtttttt
      901 ggccatcctg aagtttatat tttaatttta cctggatttg gtattgttag tcatatacta
      961 tctacttttg ctagaaaacc tgtatttggg tatttaggta tggtttatgc tatgctttca
     1021 attggtatcc ttggttttat tgtatgggct catcacatgt ttaccgtagg tttggacatc
     1081 gacacaagag cttattttac agctgctacg atgattattg cggtgcctac aggtattaaa
     1141 attttcagtt ggattgctac tttatggggt ggttctattc gtttaaaaac ccccatgcta
     1201 ttctcaattg gttttctttt cctctttact ataggggggt taactggggt tgttttagct
     1261 aattctgggg ttgatattgc tttacatgat acatattatg tggtagccca ttttcattat
     1321 gtattaagta tgggagcggc ttttacaatg tttgcagctt tttatttttg gataggtaaa
     1381 atgacaggtt tagcttaccc ggaaatttta ggtcaaatcc atttttggct tatgtttttg
     1441 ggtgtgaatt tgactttttt cccaatgcat ttcttagggc ttgctggtat gccacgacgt
     1501 ataccagatt atcctgattc ttatgctgga tggaatggtt tagcctcttt tgggtcaatt
     1561 ttatcatcta ttgcgtcatt attttttttc tttgttgtgt acattaccct tacacgagga
     1621 tctgttgaag aatcaaatcc ttgggtaaaa ggtagaggtc ttgcttttcc cgtattgcct
     1681 cgtagatcct caaaagtagg taataaataa gtattagtta ttttgttaaa attgtaaaca
     1741 gcaatttaaa taaacgttat agagtgtgtt aaggtggttg tgtcaggg
//