LOCUS       JN251074                1230 bp    cRNA    linear   VRL 31-OCT-2016
DEFINITION  Aquatic bird bornavirus 1 isolate CG_NJ82_2011 nucleoprotein gene,
            partial cds; X protein gene, complete cds; and phosphoprotein gene,
            partial cds.
ACCESSION   JN251074
VERSION     JN251074.1
KEYWORDS    .
SOURCE      Aquatic bird bornavirus 1 (ABBV-1)
  ORGANISM  Aquatic bird bornavirus 1
            Viruses; Riboviria; Orthornavirae; Negarnaviricota;
            Haploviricotina; Monjiviricetes; Mononegavirales; Bornaviridae;
            Orthobornavirus; Orthobornavirus avisaquaticae.
REFERENCE   1  (bases 1 to 1230)
  AUTHORS   Payne,S., Covaleda,L., Guo,J., Swafford,S., Baroch,J., Ferro,P.J.,
            Lupiani,B., Heatley,J. and Tizard,I.
  TITLE     Detection and Characterization of a Distinct Bornavirus Lineage
            from Healthy Canada Geese (Branta canadensis)
  JOURNAL   J. Virol. 85 (22), 12053-12056 (2011)
   PUBMED   21900161
REFERENCE   2  (bases 1 to 1230)
  AUTHORS   Covaleda,L., Guo,J., Payne,S. and Tizard,I.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-JUL-2011) Veterinary Pathobiology College of
            Veterinary Medicine and Biosciences, Texas A&M University, MS4467
            TAMU, College Station, TX 77843-4467, USA
FEATURES             Location/Qualifiers
     source          1..1230
                     /organism="Aquatic bird bornavirus 1"
                     /mol_type="viral cRNA"
                     /isolate="CG_NJ82_2011"
                     /isolation_source="brain"
                     /host="Branta canadensis"
                     /db_xref="taxon:1715293"
                     /geo_loc_name="USA"
                     /collection_date="2011"
     CDS             <1..549
                     /codon_start=1
                     /product="nucleoprotein"
                     /protein_id="AEO50556.1"
                     /translation="PHEAIDWINGQPWAGSLVLALITTDFESPGKEFMDQIKLVASYA
                     QMTTYTTIKEYLGECMDATLIIPAVAYEIKEFLKVSSELKSEHGDLFKYLGAIRHQDA
                     IKLAPRNFPNLASAAFYWSKKENPTMSGYRASTIQPGSSVKEAQLARYRRREVTRGED
                     GAHLSDEIAEIMRMIGVTGLQP"
     CDS             604..867
                     /codon_start=1
                     /product="X protein"
                     /protein_id="AEO50554.1"
                     /translation="MNSDLQLTLLELIRRLNGISTFESGGLSGRRRGPADSTSHPVEI
                     SKTEKNTARCSDTTSRTAPEDSKEEPLHDLRPRPKDRKGAIVE"
     CDS             653..>1230
                     /codon_start=1
                     /product="phosphoprotein"
                     /protein_id="AEO50555.1"
                     /translation="MASRPSSLVDSLEEEEDPQTARRIRSRSPRRRRIQPDALTQPVE
                     QLLKTLKKNPSMISDPDQRTGREQLSNDELIKQLVTELAENSMVEAEGLRGALDDIAQ
                     RMESGFESLSSLQVETIQAIQKTDYADSIKTLGENIKILDRSMKTMMETMKMMMEKID
                     LLYASSAISNPATPMLPSCPPTSTPCIHPSQLP"
BASE COUNT          379 a          274 c          269 g          308 t
ORIGIN      
        1 cctcatgagg ctattgattg gatcaacggt caaccttggg ctggctcctt agttttggca
       61 ttaataacca cagactttga atcacctggc aaagagttta tggatcaaat caaacttgtt
      121 gcaagttacg cgcagatgac tacttatact acaattaaag aatatctagg ggaatgtatg
      181 gatgcaactc tcattattcc agctgtcgcg tacgagatta aagaattcct caaagtgtcg
      241 tcagagctca agtctgaaca tggtgacctc ttcaagtatc tcggtgcaat tcgccatcaa
      301 gatgctatca agcttgctcc tcggaatttc ccgaatcttg cttctgcggc attctactgg
      361 agtaaaaagg aaaatccaac tatgtcaggg tacagagcct caacaattca acctggatct
      421 tcagttaaag aagcccagct tgcccgatat agaagacgtg aggtgactag aggtgaagat
      481 ggggcacacc tttctgatga aattgctgag ataatgagga tgattggtgt gaccggccta
      541 caaccttaaa ctgaacatac ctataaaaaa ccatattcaa atgatctgca tacaacgatt
      601 ggaatgaact ctgatttaca actcacctta ttggagctga tcagaagact caatggcatc
      661 tcgaccttcg agtctggtgg actctctgga agaagaagag gacccgcaga cagcacgtcg
      721 catccggtcg agatctccaa gacggagaag aatacagcca gatgctctga cacaaccagt
      781 cgaacagctc ctgaagactc taaagaagaa cccctccatg atctcagacc ccgaccaaag
      841 gaccggaagg gagcaattgt cgaatgatga gttgataaag cagttagtaa ccgagcttgc
      901 tgaaaatagc atggtcgaag ctgaaggttt gcggggtgca cttgatgaca ttgctcaaag
      961 aatggaatct ggttttgaat ctttatcttc gttgcaagta gagacaatcc aggctattca
     1021 aaagacggat tatgctgata gtattaagac acttggagag aacatcaaga tacttgatag
     1081 atctatgaaa actatgatgg aaacaatgaa aatgatgatg gagaagatag acctacttta
     1141 tgcttcatcc gcgattagta accctgctac tcctatgtta ccgtcttgtc cacccacctc
     1201 aacgccctgt atccatccct cccaactgcc
//