LOCUS JH884367 1008788 bp DNA linear CON 19-MAR-2015 DEFINITION Bos grunniens mutus unplaced genomic scaffold scaffold3679_1, whole genome shotgun sequence. ACCESSION JH884367 AGSK01000000 VERSION JH884367.1 DBLINK BioProject: PRJNA74739 BioSample: SAMN00744358 KEYWORDS WGS. SOURCE Bos mutus (wild yak) ORGANISM Bos mutus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos. REFERENCE 1 (bases 1 to 1008788) AUTHORS Qiu,Q., Zhang,G., Ma,T., Qian,W., Wang,J., Ye,Z., Cao,C., Hu,Q., Kim,J., Larkin,D.M., Auvil,L., Capitanu,B., Ma,J., Lewin,H.A., Qian,X., Lang,Y., Zhou,R., Wang,L., Wang,K., Xia,J., Liao,S., Pan,S., Lu,X., Hou,H., Wang,Y., Zang,X., Yin,Y., Ma,H., Zhang,J., Wang,Z., Zhang,Y., Zhang,D., Yonezawa,T., Hasegawa,M., Zhong,Y., Liu,W., Zhang,Y., Huang,Z., Zhang,S., Long,R., Yang,H., Wang,J., Lenstra,J.A., Cooper,D.N., Wu,Y., Wang,J., Shi,P., Wang,J. and Liu,J. TITLE The yak genome and adaptation to life at high altitude JOURNAL Nat. Genet. 44 (8), 946-949 (2012) PUBMED 22751099 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 1008788) AUTHORS Qiu,Q., Zhang,G., Ma,T., Qian,W., Shi,P., Cao,C., Hu,Q., Kim,J., Larkin,D., Auvil,L., Capitanu,B., Ma,J., Lewin,H., Lang,Y., Zhou,R., Xia,J., Wang,K., Liao,S., Pan,S., Lu,X., Wang,L., Hou,H., Ma,H., Zhang,J., Wang,Z., Zhang,Y., Yonezawa,T., Hasegawa,M., Zhong,Y., Liu,W., Zhang,Y., Huang,Z., Zhang,S., Long,R., Wu,Y., Wang,J. and Liu,J. TITLE Direct Submission JOURNAL Submitted (31-OCT-2011) Department of Science and Technology, Beijing Genomics Institute, Shenzhen, 2nd Office Building, Beishan Industrial Zone, Beishan Road, Yantian District, Shenzhen, Guangdong 518083, China COMMENT ##Genome-Assembly-Data-START## Assembly Method :: SOAPdenovo v. 1.14 Assembly Name :: BosGru_v2.0 Genome Coverage :: 130x Sequencing Technology :: Illumina HiSeq; Illumina GA ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..1008788 /organism="Bos mutus" /mol_type="genomic DNA" /submitter_seqid="scaffold3679_1" /isolate="yakQH1" /db_xref="taxon:72004" /chromosome="Unknown" /sex="female" /geo_loc_name="China" gene complement(136..540) /locus_tag="M91_13686" /note="contains frameshift" assembly_gap 14568..14578 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 14960..15764 /estimated_length=805 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 21156..21541 /estimated_length=386 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <21544..>42571 /locus_tag="M91_13687" mRNA join(<21544..21671,22675..22748,25006..25048,25678..25714, 26154..26255,28766..28885,31133..31264,32124..32198, 34125..34301,38009..38110,39893..39955,40051..40149, 41036..41166,42096..42207,42431..>42571) /locus_tag="M91_13687" /product="M-phase inducer phosphatase 1" CDS join(<21544..21671,22675..22748,25006..25048,25678..25714, 26154..26255,28766..28885,31133..31264,32124..32198, 34125..34301,38009..38110,39893..39955,40051..40149, 41036..41166,42096..42207,42431..42571) /locus_tag="M91_13687" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0004725 - protein tyrosine phosphatase activity [Evidence IEA]; GO_process: GO:0000087 - M phase of mitotic cell cycle [Evidence IEA]; GO_process: GO:0006470 - protein dephosphorylation [Evidence IEA]" /codon_start=1 /product="M-phase inducer phosphatase 1" /protein_id="ELR45255.1" /db_xref="InterPro:IPR000751" /db_xref="InterPro:IPR001763" /db_xref="UniProtKB/Swiss-Prot:A7MBD1" /translation="FACSPPPAPQPVVKALFGTPAAGGLSPVTNLTVTMDQLQGLGSE YEQPIEVKNSSLQRMGSSESTDSGFCLDSPGPLDSKENLENPMRRINSLPQKLLGCSP ALKRSHSDSLDHDVFQLIDQDENKENQVFEFKKPIRPASRGCLHVHGLEEGKDVFTQR QNSAPARMLSSNERDGNEPGNSISFMPQSPVTPTLSDEDDGFMDLLDGDNLKNDEETP SCMASLWTAPLVMRRTSNLGNRCKLFDSPSALCSSTIRSMLKRPDLSLEESPGGSRKR RKSVAGASPEEAASPEKPQEILHHQSLSLASSPKGTIENILDNDPRDLIGDFSKGYLF HTVAGKHQDLKYISPEIITSVLNGKFANLIKEFVIIDCRYPYEYEGGHIKGAVNLHME EEVEEFLLKKPIVPTDGKRVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPEL YVLKGGYKEFFLKCQSHCEPPSYRPMHHEDFKEDLKKFRTKSRTWAGEKSKREMYSRL KKL" assembly_gap 22167..22187 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 56693..56788 /estimated_length=96 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 78155..78367 /estimated_length=213 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 85566..86086 /estimated_length=521 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 95006..96589 /estimated_length=1584 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 97332..97711 /estimated_length=380 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 101270..101735 /estimated_length=466 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 104657..104671 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <143149..>236896 /locus_tag="M91_13688" mRNA join(<143149..143371,160319..160387,189886..190008, 192447..192560,194980..195114,195675..196751, 197544..197663,220693..220799,221573..221788, 224796..224979,225492..225551,225670..225959, 227362..227475,229664..229756,233157..233238, 234736..234848,236705..>236896) /locus_tag="M91_13688" /product="Microtubule-associated protein 4" CDS join(143149..143371,160319..160387,189886..190008, 192447..192560,194980..195114,195675..196751, 197544..197663,220693..220799,221573..221788, 224796..224979,225492..225551,225670..225959, 227362..227475,229664..229756,233157..233238, 234736..234848,236705..>236896) /locus_tag="M91_13688" /note="GO_process: GO:0007026 - negative regulation of microtubule depolymerization [Evidence IEA]" /codon_start=1 /product="Microtubule-associated protein 4" /protein_id="ELR45256.1" /db_xref="InterPro:IPR001084" /db_xref="UniProtKB/Swiss-Prot:P36225" /translation="MADLSLADALTEPSPEIEEEIKRDFIATLEAEAFDDVVGETVGK TDYIPLLDVDEKTGSSESKKKPCSDTSQVEGTPSSQAAVLANGDHGIERNDVTGFPSE FLEEKMAYQGYQNSQNWPENTNFCFEPEHMVNPIQTDPFKMHHDDGLEDSLFFPSGTT NTSAFVEQNDPLKDTYGMLPCDTFDPAAVVPQGWSAEAPNPAHLESFTSPEAVPQPLQ PTAVSNLFPLEPAEKVEMASGEERAEALEMMMKLQAADMAPSREAEMVLAKDVVPATE TGVALAKDMESPTKPDEALVKDVESSIESDMALVKDVVLPVQTEETAVKDAILPTETD VSLDEDLALSTETEVSAAQDILLFKETESIPPVTMDLASAEGTVPPTDQEMTPVKGAA SLSEIEAPLDEDIVSSTEIRSAKEIGLSSETEVALSREMGLPPETEAILDKDMAAPPE TEVIVPVKDMAPSPGIETTLAKDVAPRQEIEVTLGKDTVSLPATEMALGRNVALPPET EVTLAKDVAQPPETEVNLANNAALAKFSEAEVVPVPVKDMETAQTQEATSEDSQLKSL QDEGQSAVPLMTSPEAVVAMGQKHSLPTDEDSVLEELEQKKPSSQTSELPSETSGVAK PEEGPPTGSVSGNDITAPPNKELPPSPEKKTKPLATTQPAKTSTSKAKTQPTSLPKQT APTTLGGSNKKPMSLASGSVPAAPPKRPAAATSRPSTLPSKDTKPKPVAEAKIPEKRV SPSKPASAPAVKPGSKSTQAVPKAPATATLASPGSTSRNLSTPLPKRPTAIKTEGKPA EIKKMATKSAPADLSRPKSTTTSSVKKSTTVPGTAPPAGAPSRARPTATPPRPSGTPP VDKKPTAAKPTSSAPRLGRVAANASAPDLKNVRSKVGSTENIKHQPGGGRAKVEKKTE AAAPARKPEPNAVTKAAGPIGNAQKPPTGKVQIVSKKVSYSHIQSKCGSKDNIKHVPG GGNVQIQNKKVDISKVSSKCGSKANIKHKPGGGDVKIESQKLNFKEKAQAKVGSLDNV GHLPAGGAVKTEGGGSEAPPCPGPPAGEELAIPEAAPEAGAPTSASGLSGHTTLAGGG DQREAQTLDSQIQETS" assembly_gap 171557..171589 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 196874..196938 /estimated_length=65 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 207670..207889 /estimated_length=220 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 214782..214963 /estimated_length=182 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 215511..215553 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 229311..229599 /estimated_length=289 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 237220..237452 /estimated_length=233 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<240062..>255697) /locus_tag="M91_13689" mRNA complement(join(<240062..240315,240408..240547, 240620..240723,240815..240972,241074..241233, 241355..241468,241852..241937,242008..242089, 242172..242378,242574..242749,243011..243115, 243202..243277,243501..243718,244076..244697, 244977..245129,246811..246960,247668..247788, 248258..248559,252760..252870,253503..253633, 255496..>255697)) /locus_tag="M91_13689" /product="Putative ATP-dependent RNA helicase DHX30" CDS complement(join(240062..240315,240408..240547, 240620..240723,240815..240972,241074..241233, 241355..241468,241852..241937,242008..242089, 242172..242378,242574..242749,243011..243115, 243202..243277,243501..243718,244076..244697, 244977..245129,246811..246960,247668..247788, 248258..248559,252760..252870,253503..253633, 255496..255697)) /locus_tag="M91_13689" /note="GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0004386 - helicase activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0008026 - ATP-dependent helicase activity [Evidence IEA]" /codon_start=1 /product="Putative ATP-dependent RNA helicase DHX30" /protein_id="ELR45257.1" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR007502" /db_xref="InterPro:IPR011545" /db_xref="InterPro:IPR011709" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR014021" /db_xref="UniProtKB/Swiss-Prot:Q2NKY8" /translation="MATARRLMALAAGVSPRLRPLGPRAIGRQGGPRGLSTGCSRPDR TQEAAEAEAAPGEPGEGDGSVVNASRDLLKEFPQPKNLLNSVIGRALGISHAKDKLVY VHTNGPKKKKVTLHIKWPKSVEVEGYGSKKIDAERQAAAAACQLFKGWGLLGPRNELF DAAKYRVLADRFGSPADSWWRPEPTMPPTSWRQLNPESIRPGGPAGLSRSLGREEEED EEEELEEGTIDVTEFLSMTQQDSHAPLRDSRGGSFEMTDDDSAIRALTQFPLPKNLLA KVIQIATSSSTAKNLMQFHTVGTKTKLSTLTLLWPCPMTFVAKGRRKAEAENKAAALA CKKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRRPCTIQVPEPILRKIETFLNHYP VESSWISSELRLQGEDILPLGKDSGPLSDPITGKPYVPLSEAEELRLSQSLLELWRRR GPVWQEAPQLPVDPHRDTILSAIEQHPVVVIAGDTGCGKTTRIPQLLLERYVTEGRGA RCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGIL LRKLQSNPSLEGVSHVVVDEVHERDVNTDFLLLILLKGLQRLNPALRLVLMSATGDNE RFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLV TDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQ KAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWV SRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLVLQAKIHMPE KTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTEPPLGQWL AIVLAAIFRCLHPLLVVVSCLTRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAV SGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLA SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHK STINREATRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRRAT ISLSDSDLLRLEGDSRTVRLLRELRRALGRMVERSLRSELAALPPCVQEEHGQLLALL AELLRGPCGSFDVRKTADD" assembly_gap 241498..241843 /estimated_length=346 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 243720..244074 /estimated_length=355 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 249866..249912 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 269135..269368 /estimated_length=234 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 275321..275343 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 282333..282749 /estimated_length=417 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 288419..288912 /estimated_length=494 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 291741..292343 /estimated_length=603 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 293841..294326 /estimated_length=486 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <298193..>412550 /locus_tag="M91_13690" mRNA join(<298193..298315,306001..306086,310232..310313, 311393..311485,317059..317128,322041..322110, 325405..325480,330250..330382,333175..333292, 335798..335922,337055..337114,341486..341523, 344023..344144,347242..347313,348010..348123, 348680..348833,349719..349832,351657..351716, 358455..358713,359406..359567,377069..377124, 379179..379293,379949..380103,385399..385533, 395993..396254,409702..409878,412453..>412550) /locus_tag="M91_13690" /product="SWI/SNF complex subunit SMARCC1" CDS join(<298193..298315,306001..306086,310232..310313, 311393..311485,317059..317128,322041..322110, 325405..325480,330250..330382,333175..333292, 335798..335922,337055..337114,341486..341523, 344023..344144,347242..347313,348010..348123, 348680..348833,349719..349832,351657..351716, 358455..358713,359406..359567,377069..377124, 379179..379293,379949..380103,385399..385533, 395993..396254,409702..409878,412453..412550) /locus_tag="M91_13690" /note="GO_component: GO:0000785 - chromatin [Evidence IEA]; GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0003682 - chromatin binding [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0006333 - chromatin assembly or disassembly [Evidence IEA]" /codon_start=1 /product="SWI/SNF complex subunit SMARCC1" /protein_id="ELR45258.1" /db_xref="InterPro:IPR000953" /db_xref="InterPro:IPR001005" /db_xref="InterPro:IPR007526" /db_xref="InterPro:IPR014778" /db_xref="InterPro:IPR017884" /db_xref="UniProtKB/Swiss-Prot:Q92922" /translation="QYVHTDAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKC FMDFKAGGTLCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLLQSNCLA RPNIYLIPDIDLKLANKLKDIIKRHQGTFTDEKSKASHHVYPYPSSQEDEEWLRPVMR KDKQVLVHWGFYPDSYDTWVHSNDVDAEIEDPPIPEKPWKVHAKWILDTDVFNEWMNE EDYEVDENRKPVSFRQRISTKNEEVFVRSPERRDRKASANARKRKHSPSPPPPTPTES RKKSGKKGQASLYGKRRSQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSEN TPVKGGTVADLDEQDEETVTTGGKEDEDPGKGDQSRSVDPGEDNVTEQTNHIIIPSYA SWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRR NLTGDVCAVMRVHAFLEQWGLVNYQVDPESRPMAMGPPPTPHFNVLADTPSGLVPLHL RSPQIPATQQMLNFPEKNKEKPIDLQNFGLRTDIYSKKTLAKSKGASAGREWTEQETL LLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVP FSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAA RASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEKMETDTDAQQPEKAENKGENETDE GDKAQDGENEKNSEKEQDSEVSEDTKSEEKEAEENKELTDSCKERESDVGKKKVEHEI SEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELET IMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQQQHGPNPQQAHQHSGGP GLAQLGAAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGPGSMMPGQPMPGRMMP TVAASIHPPGSGPTPPGMPPIPGNILGPRVPLTAPNGMYPPPPQQQPPPPAPVDGGPP PPAPGPPASAAP" assembly_gap 350562..350594 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 375480..375509 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 388685..388714 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 410786..410813 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 420649..422286 /estimated_length=1638 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <422289..>432881 /locus_tag="M91_13691" mRNA join(<422289..422902,425725..425913,427757..427832, 432720..>432881) /locus_tag="M91_13691" /product="Chondroitin sulfate proteoglycan 5" CDS join(<422289..422902,425725..425913,427757..427832, 432720..432881) /locus_tag="M91_13691" /codon_start=1 /product="Chondroitin sulfate proteoglycan 5" /protein_id="ELR45259.1" /db_xref="InterPro:IPR009505" /db_xref="InterPro:IPR010555" /db_xref="UniProtKB/Swiss-Prot:O95196" /translation="YPFQGTLEPHPASDIIDIDYFEGLDGEGRGADLGSFPGSPGTSE HHPDPGGETPSWSLLDLYDDFTPFDESDFYPTTSFYDDLDEEEEEEEDKDAVGGGDLE DENDLLVPTEKPGLGPGTGQPTSRWHAVPPQHTLGMVPGSSIALRPRPGEPGRDLAPS ENGTVCRSGFVRHNGSCRSVCDLFPSYCHNGGQCYLVENIGAFCRCNTQDYIWHKGMR CESIITDFQVMCVAVGSAALVLLLLFMMTVFFAKKLYLLKTENTKLRRTNKFRTPSEL HNDNFSLSTIAEGSHPNDDSSAPHKIQEALKSCLKEEEPFNIQNSMSPKLEGGKGDQA DLEVNCLQNNLT" assembly_gap 440864..440874 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 467036..467106 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <468391..>480742 /locus_tag="M91_13692" mRNA join(<468391..468444,471941..472019,473046..473116, 475851..475969,476938..477139,479027..479078, 479367..479461,480614..>480742) /locus_tag="M91_13692" /product="hypothetical protein" CDS join(468391..468444,471941..472019,473046..473116, 475851..475969,476938..477139,479027..479078, 479367..479461,480614..480742) /locus_tag="M91_13692" /codon_start=1 /product="hypothetical protein" /protein_id="ELR45260.1" /db_xref="InterPro:IPR018627" /db_xref="UniProtKB/Swiss-Prot:Q0PNE2" /translation="MFPELNNLLNTTPEGAEQGKLTLLCDAKTDGSFLVHHFLSFYLK ANCKVCFVALVQSFSHYNMVGQKLGVSLTTARERGQLVVLEGLKSAVDIFFRPREEPH PLQFLREANAGDLQPLYAFVRDTLEPVDCGEAAWRCPVLLVDDLSVLLSLGVGPVAVL DFVHYCRATVCREWKGNVVALVHDSGDAEDKEIEVHLNGLSHQSHLILRVEGLATGFC KDVHGQLRILWRRPLQPTTPRDRSLTYQYKIQDKSVSFFAKGMSPAVL" assembly_gap 469465..470550 /estimated_length=1086 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 479090..479363 /estimated_length=274 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 490185..492472 /estimated_length=2288 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 494831..495253 /estimated_length=423 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 517950..518236 /estimated_length=287 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 552313..552735 /estimated_length=423 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 555301..555919 /estimated_length=619 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <566741..>594406 /locus_tag="M91_13693" mRNA join(<566741..566815,567217..567402,581178..581335, 582093..582313,582492..582597,583129..583301, 583681..583807,585306..585418,586366..586460, 587717..587815,587975..588193,588916..589292, 589786..589882,590329..590471,590557..591076, 591157..591242,592702..592784,592887..593053, 593612..593692,593877..594083,594161..>594406) /locus_tag="M91_13693" /product="Sterol regulatory element-binding protein cleavage-activating protein" CDS join(<566741..566815,567217..567402,581178..581335, 582093..582313,582492..582597,583129..583301, 583681..583807,585306..585418,586366..586460, 587717..587815,587975..588193,588916..589292, 589786..589882,590329..590471,590557..591076, 591157..591242,592702..592784,592887..593053, 593612..593692,593877..594083,594161..594406) /locus_tag="M91_13693" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Sterol regulatory element-binding protein cleavage-activating protein" /protein_id="ELR45261.1" /db_xref="InterPro:IPR000731" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR017986" /db_xref="InterPro:IPR019781" /db_xref="InterPro:IPR019782" /db_xref="UniProtKB/Swiss-Prot:A6QM06" /translation="FKLKQFLQQSESGSFWIFGSLVFFFHGFYLPSCPDFSLLFVHSS YPLLKLPLPGTGPVEFTTPVKDYSPPPLTSDHKPGEPNEQPEWYVGAPVAYIQQIFVK SSVSPWHKNLLAVDVFRSPLSRAFQLVEEIRNHVLKDSSGTRSLEDVCLQVTDLLPGL RKLRNLLPEHGCLLLSPGNFWQNDRERFHADPDIIRTIHQHEPKTLQTSATLKDLLFG VPGKYSGVSLYTRKRLVSYTITLVFQHYHAKFLGSLRARLMLLHPSPNCSLRAESLVH VHFKEEIGIAELIPLVTTYIILFAYIYFSTRKIDMVKSKWGLALAAVVTVLSSLLMSV GLCTLFGLTPTLNGGEIFPYLVVVIGLENVLVLTKSVVSTPVDLEVKLRIAQGLSSES WSIMKNMATELGIVLIGYFTLVPAIQEFCLFAVVGLVSDFFLQMLFFTTVLSIDIRRM ELADLNKRLPPEACLPPAKPVGRPTRFERQPTVRPSMPHTITLQPSSFRNLRLPKRLR VIYFLARTRLAQRLIMAGTVVWIGILVYTDPAGLRTYLAAQVTEQSPLGEGALAPLPV PSGVLPASHPDPAFSIFPPDASKLPENQTLPGEPPEPGGLAEGVHDSPAPEVTWGPED EELWRKLSFRHWPTLFSYYNITLAKRYVSLLPVIPVTLRLNPREALEGRHPQDGRSAW AHVHAALPQDIECLASDGMLLVSCCLAGHVCVWDAQTGDCLTRIPHPGQRRDSGVGSG LETQETWERLSDGGKGGPEEPGDSPPLRHRPRGPPPPALFGDQPDLTCLIDTNFSARP QLPEPAQPEPRYRAGRRAQDSAGYDFSRLVQRVYQEGGMAPVHTPALRPPSPGPTFPL APEDEAGFPPEKSCPSLAWAPSADGSIWSLELQGSLIVVGRSSGRLEVWDAIEGTLRC SSEEVSSGITALVFLDKRIVAARLNGSLDFFSLETHTALSPLQFRGAPGRGSSPASPA CSSSDRVACHLTHTVPCAHQKPITALKAAAGRLVTGSQDHTLRVFRLEDSCCLFTLQG HSGAITTVYIDQTMVLASGGQDGAICLWDVLTGSRVSHMFAHRGDVTSLTCTTSCVIS SGLDDLISIWDRSTGIKLYSIQQDLGCGASLGVISDNLLVTGGQGCVSFWDLNYGDLL QTVYLGKNSEAQPARQILVLDNAAIVCNFGSELSLVYVPSVLEKLD" assembly_gap 579669..579787 /estimated_length=119 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 589883..590324 /estimated_length=442 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 594932..594943 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<595015..>617083) /locus_tag="M91_13694" mRNA complement(join(<595015..595341,596477..596608, 596679..596792,596868..597006,597076..597180, 597274..597458,597534..598130,598331..598534, 598737..599289,599378..599425,599580..599711, 599783..599934,600023..600177,600253..600564, 600752..600897,601190..601255,601350..601458, 601571..601650,601797..601855,601937..601993, 602322..602369,602453..602584,602674..602754, 602941..603072,603159..603208,603699..603775, 603962..604089,609957..610031,617000..>617083)) /locus_tag="M91_13694" /product="Tyrosine-protein phosphatase non-receptor type 23" CDS complement(join(595015..595341,596477..596608, 596679..596792,596868..597006,597076..597180, 597274..597458,597534..598130,598331..598534, 598737..599289,599378..599425,599580..599711, 599783..599934,600023..600177,600253..600564, 600752..600897,601190..601255,601350..601458, 601571..601650,601797..601855,601937..601993, 602322..602369,602453..602584,602674..602754, 602941..603072,603159..603208,603699..603775, 603962..604089,609957..610031,617000..617083)) /locus_tag="M91_13694" /note="GO_function: GO:0004725 - protein tyrosine phosphatase activity [Evidence IEA]; GO_function: GO:0016791 - phosphatase activity [Evidence IEA]; GO_process: GO:0006470 - protein dephosphorylation [Evidence IEA]; GO_process: GO:0016311 - dephosphorylation [Evidence IEA]" /codon_start=1 /product="Tyrosine-protein phosphatase non-receptor type 23" /protein_id="ELR45262.1" /db_xref="InterPro:IPR000242" /db_xref="InterPro:IPR000387" /db_xref="InterPro:IPR003595" /db_xref="InterPro:IPR004328" /db_xref="UniProtKB/Swiss-Prot:Q6PB44" /translation="MEAVPRMPMIWLDLKEAGDFHFQPAAKKFVLKNYGENPEAYNEE LKKLELLRQNAVRVPRDFEGCSVLRKYLGQLHYLQSRVPMGSGQEAAVSVTWTEIFSG KSVAHEDIKYEQACILYNLGALHSMLGAMDKRVSEEGMKVSCTHFQCAAGAFSYLREH FPQAYSVDMSRQILTLNVNLMLGQAQECLLEKSMLDNRKSFLVARISAQVVDYYKEAC RALENPDTASLLGRIQKDWKKLVQMKIYYFAAVAHLHMGKQAEEQQKFGEQVAYFQSA LDKLNEAIKLAKGQPDTVQDALRFAMDVIGGKYNSAKKDNDFIYHEAVPALDTLQPVK GAPLVKPLPVNPTDPAVTGPDIFAKLVPMAAHEASSLEEKAKLLREMMAKIEDKNEVL DQFMDSLQLDPETVDNLDAYNHIPPQLMEKCAALSVRPDTVRNLVQSMQVLSGVFTDV EASLKDVRDLLEEDEALEQKLQEVVGPAAASTATSKAELAEVRREWAKYMEVHEKASF TNSELHRAMNLHVGNLRLLSGPLDQVRAALPSPALSAEDKAVLQNLKRILAKVQEMRD QRVSLEQQLRELIQKDDITAVLVTADHSEMKKLFEEQLKKYDQLRVYLEQNLAAQDNV LRALTEANVQYAAVRRVLGDLDQKWNSTLQSLVASYEAYEDLMKKSQEGKDFYADLES KVAALLERPHPPCQAREATRQQLLDRELKKKPPPRPTAPKPLLPRREEGETMEAGDLP EELRSLPPEPFLGAAAPLHFPPGPFPSSAGPGPHYLSGALPPGTYAGPTHMLQPRAPQ PPGHPGVAVAPGPALYTAPAYAPELGLVPRSSPQHGMVGSPYGGVGPPPPLAGLPSAP PPHFSGHELVVGVRPATTTVDSVQAPISSHTAPRPNMAPQPPPQPLPLQHPHVFPPQA PGLVPAQASYPFAPQPGVLGQPSPALHTQLYPGPSQDPPPPHSGALPPRPPAAEPPPC LRRGTAAADLLSSSPESQHGGPQPPGGGQPLLQPTKVDAAEGRRPQALRLIERDPYER PERLQQLRQELETFRGQLGAAGALDTVWRELQDAQELDARGRSIAIARCYSLKNRHQD VMPYDSNRVVLRSGKDDYINASRVEGLSPYCPPLVATQAPLPGTAADFWLMVHEQKVS VIVMLVSEAEMEKQKVARYFPTERGQPMVHGALSLALSSVRTTETHVERVLSLQFRDQ SLKRSLVHLHFPTWPELGLPDSPSHLLRFIQEVHAHCLHQRPLHTPVVVHCSSGVGRT GAFALLYAAVQEVEAGSGIPQLPQLVRRMRQQRKHMLQEKLHLKFCHEAVVRHVEQVL QRHGVPPPSKPTAGTGITQKNHLPQDSQDLVLGGDVPISSIQATIAKLSIRPPGGMDS PVASLPLPPPSLPESTQLPSSSPPPLSSPLPEAPQPEEEQPVPEAPSLGPPSSSLELL ASLTPEAFSLDGSLRGKQRMSKQDFLQAHNGQGLRAARPTDDPLSLLDPLWTLNKT" assembly_gap 595351..596476 /estimated_length=1126 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 598132..598328 /estimated_length=197 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 598538..598734 /estimated_length=197 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 599427..599550 /estimated_length=124 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 608725..608754 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 616751..616979 /estimated_length=229 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 627685..628569 /estimated_length=885 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <630336..>634275 /locus_tag="M91_13695" mRNA join(<630336..630515,631196..631297,632972..633064, 634135..>634275) /locus_tag="M91_13695" /product="15 kDa protein A" CDS join(630336..630515,631196..631297,632972..633064, 634135..634275) /locus_tag="M91_13695" /note="GO_component: GO:0005576 - extracellular region [Evidence IEA]; GO_process: GO:0006952 - defense response [Evidence IEA]" /codon_start=1 /product="15 kDa protein A" /protein_id="ELR45263.1" /db_xref="InterPro:IPR001894" /db_xref="UniProtKB/Swiss-Prot:P26202" /translation="MAGAWKALVLVAGLAAVACVAQRGLSYEEIVTQALKFFNQGRRG QRIFGLLESTPPPPDLNSTTIPLNFRIKETVCFLLWYRRRSRQCPFREGGEERNCTGS FFMLRQLRLLSLNCVPDRELEPEPRRERRSAGSAGEDPPELDSSNLPPAVRDMYQRAK YEIISNILRNF" assembly_gap 633622..633947 /estimated_length=326 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<646516..>695127) /locus_tag="M91_13696" mRNA complement(join(<646516..646902,647628..647739, 649503..649607,655656..655878,657397..657533, 658739..658899,661611..661809,666026..666166, 668795..668925,695005..>695127)) /locus_tag="M91_13696" /product="Kelch-like protein 18" CDS complement(join(646516..646902,647628..647739, 649503..649607,655656..655878,657397..657533, 658739..658899,661611..661809,666026..666166, 668795..668925,695005..>695127)) /locus_tag="M91_13696" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Kelch-like protein 18" /protein_id="ELR45264.1" /db_xref="InterPro:IPR000210" /db_xref="InterPro:IPR006652" /db_xref="InterPro:IPR011705" /db_xref="InterPro:IPR013069" /db_xref="InterPro:IPR013089" /db_xref="UniProtKB/Swiss-Prot:O94889" /translation="EDGAEELEDLVHFSVSELPSRGYGVMEEIRRQGKLCDVTLKIGD HKFSAHRIVLAASIPYFHAMFTNDMMECKQDEIVMQGMDPSALEALINFAYNGHLAID QQNVQSLLMGASFLQLQSIKDACCTFLRERLHPKNCLGVRQFAETMMCALLYDAANSF IHQHFVEVSMSEEFLALPLEDVLELVSRDELNVKSEEQVFEAVLTWVRYDRDQRGPCL PELLSNIRLPLCRPQFLSDRVQQDDLVRCCHKCRDLVDEAKDYHLMPERRPHLPAFRT RPRCCTSIAGLIYAVGGLNSAGDSLNVVEVFDPVANRWEKCHPMSTARSRVGVAVVNG LLYAIGGYDGQLRLSTVEVYNPETDTWTRVRSMNSKRSAMGTVVLDGQIYVCGGYDGN SSLSSVETYSPETDKWTVVTPMSSNRSAAGVTVFEGRIYVSGGHDGLQIFSSVEHYNH HTATWHPAASMLNKRCRHGAASLGSKMFVCGGYDGSGFLSIAEVYSSVADQWCLIVPM LTRRSRVSLVASCGRLYAVGGYDGQSNLSSVEMYDPDTDRWTFMAPMACHEGGVGVGC IPLLTI" assembly_gap 652243..653396 /estimated_length=1154 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 676087..676139 /estimated_length=53 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 688781..690104 /estimated_length=1324 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 695128..695245 /estimated_length=118 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <698782..>728781 /locus_tag="M91_13697" mRNA join(<698782..698874,700530..700695,702481..702587, 705215..705439,708964..709047,709160..709252, 709984..710131,711213..711277,713218..713295, 718776..718844,719662..719766,720999..721054, 721794..721884,722359..722492,724042..724233, 725367..725581,727653..727702,727751..727865, 728165..728280,728677..>728781) /locus_tag="M91_13697" /product="Kinesin-like protein KIF9" CDS join(698782..698874,700530..700695,702481..702587, 705215..705439,708964..709047,709160..709252, 709984..710131,711213..711277,713218..713295, 718776..718844,719662..719766,720999..721054, 721794..721884,722359..722492,724042..724233, 725367..725581,727653..727702,727751..727865, 728165..728280,728677..>728781) /locus_tag="M91_13697" /note="GO_function: GO:0003777 - microtubule motor activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0007018 - microtubule-based movement [Evidence IEA]" /codon_start=1 /product="Kinesin-like protein KIF9" /protein_id="ELR45265.1" /db_xref="InterPro:IPR001752" /db_xref="UniProtKB/Swiss-Prot:Q9HAQ2" /translation="MGSRKKVHAFVRVRPTDDFAHEMIKYRDDNKTIDIHLKKDSRRG VVNNQQTDWSFKLDRVLHDASQDLVYETVAKDVVSQALNGFNGTIMCYGQTGAGKTYT MTGATENYKHRGILPRALQQVFKMIEERPTHAITVRVSYLEIYNESLFDLLSTLPYVG PSVTPMTIVENPQGVFIKGLSVHLTSQEEDAFSLLFEGETNRIIASHTMNKNSSRSHC IFTIYVEARSRTLSDEKYVTSKINLVDLAGSERLGKSRSEGRVLKEATYINKSLSFLE QAIIALGDQKRDHIPFRQCKLTHALKDSLGGNCNMVLVTNIYGEAAQLEETLSSLRFA SRMKLVTTEPTVNEKYDAERMVKNLEKELALLKQELAIHDSLANRTLVNYDPMDEIQI AEINSQVRRYLEGTLEEIDIINLRQIQEVFNQFRVVLSQQEQEVESTLRRKYTLIDKN DYAAISAVQKAGLVDADGHLVGEPDGQGFGLGVAPFSTKPGKKSKSKKMFKEQLSSSA RKEGASSPLSGKDLDVSTSKTQLTPSSKDGDVKDMVVRDRETSNTEPLASDSPKEELR PPRPSTPPAKPVAFEDFKNERGSEINRIFKENKSILNERRKRASETTQRINAIKREID MTKEALNLQKSLREKQGEYENKGLMIIDEEEFLLKDLKKQYRTEYQDLRDLRAEIQYC QHLVDQCRHRLLTEFDIWYNESFFVPEDLQMAVKPGGSIRPGMMPLSKIVSLGEDDQD RFSQLQQTTLPEGPDSVSFYNAKVKMEQK" assembly_gap 727703..727743 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 736701..736742 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 737324..739846 /estimated_length=2523 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 760200..760922 /estimated_length=723 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 776681..777872 /estimated_length=1192 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 780134..780995 /estimated_length=862 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <785606..>842669 /locus_tag="M91_13698" mRNA join(<785606..789966,792775..792906,794413..794541, 797539..797662,801821..801898,803639..803736, 805860..805986,812204..812338,813399..813518, 815134..815796,826117..826165,827353..827536, 829230..829899,831203..831337,832396..832535, 835357..835468,840281..840361,842062..842163, 842508..>842669) /locus_tag="M91_13698" /product="Histone-lysine N-methyltransferase SETD2" CDS join(<785606..789966,792775..792906,794413..794541, 797539..797662,801821..801898,803639..803736, 805860..805986,812204..812338,813399..813518, 815134..815796,826117..826165,827353..827536, 829230..829899,831203..831337,832396..832535, 835357..835468,840281..840361,842062..842163, 842508..842669) /locus_tag="M91_13698" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_component: GO:0005694 - chromosome [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0018024 - histone-lysine N-methyltransferase activity [Evidence IEA]; GO_process: GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]" /codon_start=1 /product="Histone-lysine N-methyltransferase SETD2" /protein_id="ELR45266.1" /db_xref="InterPro:IPR001202" /db_xref="InterPro:IPR001214" /db_xref="InterPro:IPR003616" /db_xref="InterPro:IPR006560" /db_xref="InterPro:IPR013257" /db_xref="UniProtKB/Swiss-Prot:Q9BYW2" /translation="AKIENVPKTGFIKGPMFKGVASSRFLPKGTKTKVNLEEQGRQKV SFSFSLTKKTLQNRFLTALGNEKQNDTPNSPVVPLQVDSTPKVKTDIGDTLSTTEESS PPKSRVELGKIHFKKHLLHVTSRPLLTATTAVASPSPPMAPLPAVRAESTTVDSPPSS PPPPPPPPQATTPSSPAPVTEPVALPHTPVTVLMTAPVDVAARALKEPPVTIVPESSE VDTKQDPVSNSSEEHITHSLNEQADIPSQKEDSHIGKEEETPDSSKSSLGSKKTGSKK KSSQSEGTFLGSESDEDSVRTSSSQRSHDLKFSANIDRERDSKKSLATLKSEDLGKSS RSKTERDDKYFSYSKLERDTRYISSRCRERERRRSRSRSRSDRGSRTSLSYSRSERSH YYDSDRRYHRSSPYRERTRYSRAYTDSRARESSDSEDEYKKTYSRRTSSHSSSYRNLR TSSSYSKSDRDCKTESSYLEIEKRGKYSSKLERESKRTSENEAMKRCCSPPNELGFRR GSSYSKHDNNASRYKSAPSKPVSKSDKFKNSFCCTELNEETKQSHSFSLQTPCSKGSE LRVISKIPEREKTRSPSPSNRLNDSPTFKKLDGSPVFKSEFIGHDSHDSIKEVDSLCK VKNDQLRSYCPTELNINGSPGAESDLAAFCTSKHDTVLMSSDDSVTGSEVSPLVKTCM LSSNGFQNINRCKEKALDDTCMKHSKSESPFRETEPLVSPHQDQLISLPVMTMDYSKT VVKEPVEVRVSCCKTKDSDIYCTSNDNHPSSCHSGAENIEPLVTKMSSNSFMNVHLKS KTVICDNGNLIDQHSKFACGEYKQSVGSTSSASVNHFDDLYHTPGSSCIASSLQSLPP GIKVNSLTLLQCGENISPVFDAVPKSKNSEFLKHAEKETVIEVGSDLPDSGRGFASWD NRHNNGLSEKCVQEAHEEGNSLLPDRRGRPESSLDEEGGRGHAHTSDDSEVVFSSCDL NLTMEDSDGITYTLKCDSSGHASEIVSTVHEDYSGSSESSSDESDSEDTDSDDSSIPR NRLQSVVVVPKNSTLTMEETSPCSSRSSQSYRHYSDHWEDERLEPRRHSYEEKFESIT SKACPQTEKFFFHKAAEKNSEISFIQPSRKQIDNHLPEIAHPQSDGVDSTSHPDIKSD PLGHSNSEETVKAKIVSQQQEELPVYSSDDFEDVSNKSRQQTTFPNRPDSRLGKTDSS FSSCEISRVDGFRSSEELRNLGWDFSQQEKPTTTYQQPDSSYGACGGHKYQQSAEQYS GARNYWQGNGYWDPRSASRPPGAGVVYDRIQGQVPDSLTDDREEEENWDQRGGSHFSS QSSKFFLSLQKDKGSVQAPEISSNSIKDSLAVNEKKDLLKNLDRNDMKDRGPLKKRRQ ELESDSESDGELQDRKKVRMEIEQGETAVPLGSALVGPSCVMEDFRDPQRWKEYAKQG KMPCYFDLIEENVYLTERKKNKSHRDIKRMQCECTPLSKDERAQGEIACGEDCLNRLL MIECSSRCPNGDYCSNRRFQRKQHADVEVILTEKKGWGLRAAKDLPSNTFVLEYCGEV LDHKEFKARVKEYARNKNIHYYFMALKNDEIIDATQKGNCSRFMNHSCEPNCETQKWT VNGQLRVGFFTTKLVPSGSELTFDYQFQRYGKEAQKCFCGSANCRGYLGGENRVSIRA AGGKMKKERSRKKDSVDGELEALMENGEGLSDKNQVLSLSRLMVRIETLEQKLTCLKL IQNTHSQSCLKSFLERHGLSLLWIWMAELGDGRESNQKLQEEIIKTLEHLPIPTKNML EESKVLPIIQRWSQTKTAIPQLSEGDGYSSENTSRAHTPLNTPDPSTKLSAEADTDTP KKLMFRRLKIISENSMDSAISDATSELEGKDGKEDLDQLENVPIEEEEEPQPQHLLVQ QLPEPKVDSDIAAEASKLPTSELEADAELEHKESSGSKLDEPIAEETPSQDEEEGVSD VESERSQEPPDKTVDISDLATKLLDSWKDLKEVYRIPKKSQTEKESTITERGRDAVGF RDQTVAPKTPNRSRERDPDKQTQIKEKRKRRGSLSPPSSAYERGTKRPDDRYDTPTSK KKVRIKDRNKLSTEERRKLFEQEVAQREAQKQQQQMQNLGMTSPLPYDSLGYNAPHHP FAGYPPGYPMQAYVDPSNPNAGKVLLPTPSMDPVCSPAAYDHSQPLVGHSTEPLAAPP PVPVVPHVAAPVEVSSSQYVAQSDGVVHQDSNVTVLPVPAPGPVQGQNYSVWDSNQQS VSVQQQYSPAQSQATIYYQGQACPTVYGVTSPYSQTTPPIVQSYAQPSLQYIQGQQIF TAHPQGVVVQPTAAVTTIVAPGQPQPLQPPEMVVTNNLLDLPPPSPPKPKTIVLPPNW KTARDPEGKIYYYHVVTRQTQWDPPTWESPGDDASLEHEAEMDLGTPTYDENPMKTSK KPKTAEADTSSELAKKSKEVFRKEMSQFIVQCLNPYRKPDCKVGRITTTEDFKHLARK LTHGVMNKELKYCKNPEDLECNENVKHKTKEYIKKYMQKFGAVYKPKEDTELE" assembly_gap 798802..799873 /estimated_length=1072 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 800378..800401 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 800837..801039 /estimated_length=203 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<845985..>847829) /locus_tag="M91_13699" mRNA complement(join(<845985..846304,846402..846544, 846660..846843,847787..>847829)) /locus_tag="M91_13699" /product="Tumor necrosis factor receptor superfamily member 16" CDS complement(join(845985..846304,846402..846544, 846660..846843,847787..847829)) /locus_tag="M91_13699" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0007165 - signal transduction [Evidence IEA]" /codon_start=1 /product="Tumor necrosis factor receptor superfamily member 16" /protein_id="ELR45267.1" /db_xref="InterPro:IPR000488" /db_xref="UniProtKB/Swiss-Prot:P18519" /translation="MLQNSSHREAMVHVDKTRREQDREGVWAAAGGALAPSTSSPFSP EPPGASGSIIPVYCALLATVVLGLLAYVVFKCWRSRKQRQQLAKARTAELGALSRDQL HGDSSVFRDSPAGLEPCAPSQGPPPELGCRLYLHLPRQQQEEVERLLEVSGEPANSWR GLAGRLGYQAEAVETMARSPGPASALLRDWAVQEGSGATLRALADALAAMGREDVIRA LSSPAEGCSVV" gene complement(849960..871299) /locus_tag="M91_13700" /note="contains frameshift" assembly_gap 853661..853735 /estimated_length=75 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 857073..857105 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 859725..859828 /estimated_length=104 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 864488..864500 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 879979..880499 /estimated_length=521 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <882825..>919042 /locus_tag="M91_13701" mRNA join(<882825..882920,910728..910795,916453..916532, 917411..917472,917697..917731,918781..918857, 918954..>919042) /locus_tag="M91_13701" /product="Coiled-coil domain-containing protein 12" CDS join(882825..882920,910728..910795,916453..916532, 917411..917472,917697..917731,918781..918857, 918954..919042) /locus_tag="M91_13701" /codon_start=1 /product="Coiled-coil domain-containing protein 12" /protein_id="ELR45268.1" /db_xref="InterPro:IPR013169" /db_xref="UniProtKB/Swiss-Prot:Q8WUD4" /translation="MAATAAGVGRLEEEALRRKERLKALREKTGRKDKEDGEPNTKQL REGEEEGEKHRELRLRNYVPEDEDLKKRRVPQAKPVAVEEKVKEQLEAAKPEPVIEEV DLANLAPRKPDWDLKRDVAKKLEKLEKRTQRAIAELIRERLKGQEENLASAVATTAAT EPEACDSD" assembly_gap 897125..897157 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 907586..907702 /estimated_length=117 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 917929..917990 /estimated_length=62 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 927931..927997 /estimated_length=67 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 928532..928625 /estimated_length=94 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(932725..953344) /locus_tag="M91_13702" /note="contains frameshift" assembly_gap 933673..933786 /estimated_length=114 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 937650..937785 /estimated_length=136 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 938333..938396 /estimated_length=64 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 951085..951164 /estimated_length=80 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 953375..954055 /estimated_length=681 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 954307..955164 /estimated_length=858 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 963052..963275 /estimated_length=224 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <973243..>979122 /locus_tag="M91_13703" mRNA join(<973243..973383,976423..976450,976594..976743, 977525..977698,978880..978957,979094..>979122) /locus_tag="M91_13703" /product="Myosin light chain 3" CDS join(973243..973383,976423..976450,976594..976743, 977525..977698,978880..978957,979094..979122) /locus_tag="M91_13703" /codon_start=1 /product="Myosin light chain 3" /protein_id="ELR45269.1" /db_xref="InterPro:IPR018249" /db_xref="UniProtKB/Swiss-Prot:P85100" /translation="MAPKKPDPKKDEAKAGAKAAAAPAPAPAPPPAPEPSKEPEFDPS KIKIEFTPEQIEEFKEAFTLFDRTPKCEMKITYGQCGDVLRALGQNPTQAEVLRVLGK PKQEELNSKMMDFDTFLPMLQHISKNKDTGTYEDFVEGLRVFDKEGNGTVMGAELRHV LATLGEKLTEDEVEKLMAGQEDSNGCINYEAFVKHIMAG" assembly_gap 974053..974702 /estimated_length=650 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 990425..990514 /estimated_length=90 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1003531..1005198 /estimated_length=1668 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1007349..1007414 /estimated_length=66 /gap_type="within scaffold" /linkage_evidence="unspecified" CONTIG join(AGSK01189445.1:1..14567,gap(11),AGSK01189446.1:1..381, gap(805),AGSK01189447.1:1..5391,gap(386),AGSK01189448.1:1..625, gap(21),AGSK01189449.1:1..34505,gap(96),AGSK01189450.1:1..21366, gap(213),AGSK01189451.1:1..7198,gap(521),AGSK01189452.1:1..8919, gap(1584),AGSK01189453.1:1..742,gap(380),AGSK01189454.1:1..3558, gap(466),AGSK01189455.1:1..2921,gap(15),AGSK01189456.1:1..66885, gap(33),AGSK01189457.1:1..25284,gap(65),AGSK01189458.1:1..10731, gap(220),AGSK01189459.1:1..6892,gap(182),AGSK01189460.1:1..547, gap(43),AGSK01189461.1:1..13757,gap(289),AGSK01189462.1:1..7620, gap(233),AGSK01189463.1:1..4045,gap(346),AGSK01189464.1:1..1876, gap(355),AGSK01189465.1:1..5791,gap(47),AGSK01189466.1:1..19222, gap(234),AGSK01189467.1:1..5952,gap(23),AGSK01189468.1:1..6989, gap(417),AGSK01189469.1:1..5669,gap(494),AGSK01189470.1:1..2828, gap(603),AGSK01189471.1:1..1497,gap(486),AGSK01189472.1:1..56235, gap(33),AGSK01189473.1:1..24885,gap(30),AGSK01189474.1:1..13175, gap(30),AGSK01189475.1:1..22071,gap(28),AGSK01189476.1:1..9835, gap(1638),AGSK01189477.1:1..18577,gap(11),AGSK01189478.1:1..26161, gap(71),AGSK01189479.1:1..2358,gap(1086),AGSK01189480.1:1..8539, gap(274),AGSK01189481.1:1..10821,gap(2288),AGSK01189482.1:1..2358, gap(423),AGSK01189483.1:1..22696,gap(287),AGSK01189484.1:1..34076, gap(423),AGSK01189485.1:1..2565,gap(619),AGSK01189486.1:1..23749, gap(119),AGSK01189487.1:1..10095,gap(442),AGSK01189488.1:1..4607, gap(12),AGSK01189489.1:1..407,gap(1126),AGSK01189490.1:1..1655, gap(197),AGSK01189491.1:1..209,gap(197),AGSK01189492.1:1..692, gap(124),AGSK01189493.1:1..9174,gap(30),AGSK01189494.1:1..7996, gap(229),AGSK01189495.1:1..10705,gap(885),AGSK01189496.1:1..5052, gap(326),AGSK01189497.1:1..18295,gap(1154),AGSK01189498.1:1..22690, gap(53),AGSK01189499.1:1..12641,gap(1324),AGSK01189500.1:1..5023, gap(118),AGSK01189501.1:1..32457,gap(41),AGSK01189502.1:1..8957, gap(42),AGSK01189503.1:1..581,gap(2523),AGSK01189504.1:1..20353, gap(723),AGSK01189505.1:1..15758,gap(1192),AGSK01189506.1:1..2261, gap(862),AGSK01189507.1:1..17806,gap(1072),AGSK01189508.1:1..504, gap(24),AGSK01189509.1:1..435,gap(203),AGSK01189510.1:1..52621, gap(75),AGSK01189511.1:1..3337,gap(33),AGSK01189512.1:1..2619, gap(104),AGSK01189513.1:1..4659,gap(13),AGSK01189514.1:1..15478, gap(521),AGSK01189515.1:1..16625,gap(33),AGSK01189516.1:1..10428, gap(117),AGSK01189517.1:1..10226,gap(62),AGSK01189518.1:1..9940, gap(67),AGSK01189519.1:1..534,gap(94),AGSK01189520.1:1..5047, gap(114),AGSK01189521.1:1..3863,gap(136),AGSK01189522.1:1..547, gap(64),AGSK01189523.1:1..12688,gap(80),AGSK01189524.1:1..2210, gap(681),AGSK01189525.1:1..251,gap(858),AGSK01189526.1:1..7887, gap(224),AGSK01189527.1:1..10777,gap(650),AGSK01189528.1:1..15722, gap(90),AGSK01189529.1:1..13016,gap(1668),AGSK01189530.1:1..2150, gap(66),AGSK01189531.1:1..1374) //