LOCUS JH432007 565381 bp DNA linear CON 18-MAR-2015 DEFINITION Strigamia maritima strain Brora unplaced genomic scaffold scf7180001248673, whole genome shotgun sequence. ACCESSION JH432007 AFFK01000000 VERSION JH432007.1 DBLINK BioProject: PRJNA20501 BioSample: SAMN00009008 KEYWORDS WGS. SOURCE Strigamia maritima ORGANISM Strigamia maritima Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Myriapoda; Chilopoda; Pleurostigmophora; Geophilomorpha; Linotaeniidae; Strigamia. REFERENCE 1 (bases 1 to 565381) AUTHORS Richards,S.R., Qu,J., Jiang,H., Jhangiani,S.N., Agravi,P., Goodspeed,R., Gross,S., Mandapat,C., Jackson,L., Mathew,T., Pu,L., Thornton,R., Saada,N., Wilczek-Boney,K.B., Lee,S., Kovar,C., Wu,Y., Scherer,S.E., Worley,K.C., Muzny,D.M. and Gibbs,R. TITLE Direct Submission JOURNAL Submitted (31-MAY-2011) Human Genome Sequencing Center, Department of Molecular and Human Genetics, Baylor College of Medicine, One Baylor Plaza, Houston, TX 77030, USA COMMENT Contact ncbi-contacts@bcm.tmc.edu for more information. The centipede Strigamia maritima genome was sequenced as part of the Ecdysozoan Comparative Genome Sequencing project (http://www.genome.gov/Pages/Research/Sequencing/SeqProposals/Ecdys ozoaProposalFinalPDF.pdf). DNA was provided by Michael Akam. We generated 15X coverage using 454 XLR technology, with an additional 30X clone coverage in 3kb and 8kb insert pe sequencing, all generated on the 454 platform. We assembled the genome using the Celera assembler (Science 287:2196-2204). Small and redundant contigs were omitted from the assembly. Funding was provided by the National Human Genome Research Institute, National Institutes of Health (NHGRI). ##Genome-Assembly-Data-START## Assembly Method :: Celera Assembler v. 6.1 Assembly Name :: Smar_1.0 Genome Coverage :: 23x Sequencing Technology :: 454 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..565381 /organism="Strigamia maritima" /mol_type="genomic DNA" /submitter_seqid="scf7180001248673" /strain="Brora" /db_xref="taxon:126957" /chromosome="Unknown" assembly_gap 5959..6276 /estimated_length=318 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 8249..8585 /estimated_length=337 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 15816..15835 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 37683..37702 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 51702..51721 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 53573..53592 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 55964..55983 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 65041..65060 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 67068..67519 /estimated_length=452 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 71443..71462 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 92439..93037 /estimated_length=599 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 103837..103856 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 125135..125154 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 130300..130478 /estimated_length=179 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 133190..133209 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 136619..137123 /estimated_length=505 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 138222..138241 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 148739..149555 /estimated_length=817 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 150158..151113 /estimated_length=956 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 154438..154457 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 155975..156000 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 159663..160017 /estimated_length=355 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 162434..162453 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 169309..169328 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 179853..179872 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 182777..182796 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 183809..183828 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 203283..203302 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 210416..211062 /estimated_length=647 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 217664..218263 /estimated_length=600 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 226280..226299 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 232646..232665 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 234077..234406 /estimated_length=330 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 235139..235158 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 252729..252748 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 306281..306595 /estimated_length=315 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 343463..343876 /estimated_length=414 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 346396..346415 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 352863..352882 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 364850..364869 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 368238..368257 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 369930..369949 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 385134..385344 /estimated_length=211 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 398243..398262 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 400275..400294 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 404846..404865 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 425060..425161 /estimated_length=102 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 442852..442871 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 453071..453329 /estimated_length=259 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 531156..531472 /estimated_length=317 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 553845..553864 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 559664..560964 /estimated_length=1301 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 562095..563817 /estimated_length=1723 /gap_type="within scaffold" /linkage_evidence="unspecified" CONTIG join(AFFK01022624.1:1..5958,gap(318),AFFK01022625.1:1..1972, gap(337),AFFK01022626.1:1..7230,gap(20),AFFK01022627.1:1..21847, gap(20),AFFK01022628.1:1..13999,gap(20),AFFK01022629.1:1..1851, gap(20),complement(AFFK01003183.1:1..2371),gap(20), AFFK01022630.1:1..9057,gap(20),complement(AFFK01012244.1:1..2007), gap(452),AFFK01012339.1:1..3923,gap(20),AFFK01022631.1:1..20976, gap(599),AFFK01022632.1:1..10799,gap(20),AFFK01022633.1:1..21278, gap(20),AFFK01022634.1:1..5145,gap(179),AFFK01012340.1:1..2711, gap(20),AFFK01022635.1:1..3409,gap(505),AFFK01010432.1:1..1098, gap(20),AFFK01022636.1:1..10497,gap(817), complement(AFFK01003747.1:1..602),gap(956),AFFK01012341.1:1..3324, gap(20),complement(AFFK01001341.1:1..1517),gap(26), AFFK01022637.1:1..3662,gap(355),AFFK01012428.1:1..2416,gap(20), AFFK01022638.1:1..6855,gap(20),AFFK01022639.1:1..10524,gap(20), AFFK01022640.1:1..2904,gap(20),complement(AFFK01010429.1:1..1012), gap(20),AFFK01022641.1:1..19454,gap(20),AFFK01022642.1:1..7113, gap(647),AFFK01022643.1:1..6601,gap(600),AFFK01022644.1:1..8016, gap(20),AFFK01022645.1:1..6346,gap(20),AFFK01022646.1:1..1411, gap(330),AFFK01022647.1:1..732,gap(20),AFFK01022648.1:1..17570, gap(20),AFFK01022649.1:1..53532,gap(315),AFFK01022650.1:1..36867, gap(414),AFFK01022651.1:1..2519,gap(20),AFFK01022652.1:1..6447, gap(20),AFFK01022653.1:1..11967,gap(20),AFFK01022654.1:1..3368, gap(20),AFFK01022655.1:1..1672,gap(20),AFFK01022656.1:1..15184, gap(211),AFFK01022657.1:1..12898,gap(20),AFFK01022658.1:1..2012, gap(20),AFFK01012437.1:1..4551,gap(20),AFFK01022659.1:1..20194, gap(102),AFFK01022660.1:1..17690,gap(20),AFFK01022661.1:1..10199, gap(259),AFFK01022662.1:1..77826,gap(317),AFFK01022663.1:1..22372, gap(20),AFFK01022664.1:1..5799,gap(1301),AFFK01012628.1:1..1130, gap(1723),AFFK01022665.1:1..1564) //