LOCUS JH169785 824178 bp DNA linear CON 14-MAR-2015 DEFINITION Heterocephalus glaber unplaced genomic scaffold scaffold614, whole genome shotgun sequence. ACCESSION JH169785 AFSB01000000 VERSION JH169785.1 DBLINK BioProject: PRJNA68323 BioSample: SAMN00217190 KEYWORDS WGS. SOURCE Heterocephalus glaber (naked mole-rat) ORGANISM Heterocephalus glaber Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus. REFERENCE 1 (bases 1 to 824178) AUTHORS Kim,E.B., Fang,X., Fushan,A.A., Huang,Z., Lobanov,A.V., Han,L., Marino,S.M., Sun,X., Turanov,A.A., Yang,P., Yim,S.H., Zhao,X., Kasaikina,M.V., Stoletzki,N., Peng,C., Polak,P., Xiong,Z., Kiezun,A., Zhu,Y., Chen,Y., Kryukov,G.V., Zhang,Q., Peshkin,L., Yang,L., Bronson,R.T., Buffenstein,R., Wang,B., Han,C., Li,Q., Chen,L., Zhao,W., Sunyaev,S.R., Park,T.J., Zhang,G., Wang,J. and Gladyshev,V.N. TITLE Genome sequencing reveals insights into physiology and longevity of the naked mole rat JOURNAL Nature 479 (7372), 223-227 (2011) PUBMED 21993625 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 824178) AUTHORS Kim,E.B., Fang,X., Fushan,A., Huang,Z., Lobanov,A., Han,L., Marino,S., Sun,X., Turanov,A., Yang,P., Yim,S.H., Zhao,X., Kasaikina,M., Stoletzki,N., Peng,C., Polak,P., Xiong,Z., Kiezun,A., Zhu,Y., Chen,Y., Kryukov,G., Zhang,Q., Peshkin,L., Yang,L., Bronson,R., Wang,B., Han,C., Li,Q., Chen,L., Zhao,W., Sunyaev,S., Park,T., Zhang,G., Wang,J. and Gladyshev,V. TITLE Direct Submission JOURNAL Submitted (12-JUL-2011) Department of Science and Technology, Beijing Genomics Institute, Shenzhen, 2nd Office Building, Beishan Industrial Zone, Beishan Road, Yantian District, Shenzhen, Guangdong 518083, China COMMENT Source DNA is available from laboratory of Thomas Park at University of Illinois at Chicago. ##Genome-Assembly-Data-START## Assembly Method :: SOAPdenovo v. 1.05 Assembly Name :: HetGla_1.0 Genome Coverage :: 90x Sequencing Technology :: Illumina HiSeq 2000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..824178 /organism="Heterocephalus glaber" /mol_type="genomic DNA" /submitter_seqid="scaffold614" /db_xref="taxon:10181" /chromosome="Unknown" /sex="male" assembly_gap 269..370 /estimated_length=102 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 686..710 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<12481..>13416) /locus_tag="GW7_17752" mRNA complement(join(<12481..12651,13228..>13416)) /locus_tag="GW7_17752" /product="Taste receptor type 2 member 13" CDS complement(join(12481..12651,13228..13416)) /locus_tag="GW7_17752" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO_process: GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO_process: GO:0050909 - sensory perception of taste [Evidence IEA]" /codon_start=1 /product="Taste receptor type 2 member 13" /protein_id="EHB07503.1" /db_xref="InterPro:IPR007960" /db_xref="UniProtKB/Swiss-Prot:Q646B6" /translation="MESGLQSFFTLIIVVQFTIGNLSNGFVVLINCIDWVSKRKLSSV DQILSTLALSRIGVIWEILMPQSDLVHALCLAIGLIYPSSHSLILILGNSKLRQASLL VLRQLKCGTKDETFTTP" assembly_gap 32941..33106 /estimated_length=166 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 35858..36237 /estimated_length=380 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 49836..52713 /estimated_length=2878 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 54420..56208 /estimated_length=1789 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 60976..61097 /estimated_length=122 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 69941..72663 /estimated_length=2723 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 111815..112016 /estimated_length=202 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <113789..>119363 /locus_tag="GW7_17753" mRNA join(<113789..113852,114436..114534,115522..115647, 115810..115961,117171..117277,119219..>119363) /locus_tag="GW7_17753" /product="C-type lectin domain family 1 member B" CDS join(113789..113852,114436..114534,115522..115647, 115810..115961,117171..117277,119219..119363) /locus_tag="GW7_17753" /note="GO_function: GO:0005488 - binding [Evidence IEA]" /codon_start=1 /product="C-type lectin domain family 1 member B" /protein_id="EHB07504.1" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR016187" /db_xref="UniProtKB/Swiss-Prot:Q9P126" /translation="MQDEDGYITLNIKPQKPAPSSVDPASSSWWRVMSLILLILSLGM VAALVALGIMSVTQQNNLQAEKENLSGTVQNLAKNFCQHIIQQLEENQKRSADHKCSP CDTNWRYHGDSCYGFFRHNLTWEESKRYCSNRNATLTKTASKNILDYIKDRTVFIRWV GLSRQNADKVWMWDDGSVLSKNMLEFFEDGGENMDCAYFHKGKIYPTFCKNRHYLMCE RKAGMTNVDQLL" gene <123359..>136238 /locus_tag="GW7_17754" mRNA join(<123359..123449,123981..124061,130599..130745, 133139..133290,134387..134508,136106..>136238) /locus_tag="GW7_17754" /product="C-type lectin domain family 9 member A" CDS join(123359..123449,123981..124061,130599..130745, 133139..133290,134387..134508,136106..136238) /locus_tag="GW7_17754" /note="GO_function: GO:0005488 - binding [Evidence IEA]" /codon_start=1 /product="C-type lectin domain family 9 member A" /protein_id="EHB07505.1" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR016187" /db_xref="UniProtKB/Swiss-Prot:Q6UXN8" /translation="MHEEEIYTSLQWDNQTSHSSQKCLSSTKISGIWCTLMVISCIFC VGLLTTSIFLGIKVFQATTTIMKQEEKLIQWDRELLNCTQWEKKYTLQRKYYQTLLQN VFSSAHNCGPCPQNWIQNGKSCYHVFKIWKTWDSGKENCLKEGSRLLQIDSKEEMDFV SGSLQKVKASYEYWVGASQDGPHGPWLWQDGSTPPPDLFPISRPPSVSQVCRYLRDNS LFSANCTNWKYFICEKDALRASI" assembly_gap 124255..124366 /estimated_length=112 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<142063..>160529) /locus_tag="GW7_17755" mRNA complement(join(<142063..142213,143641..143707, 149036..149134,160406..>160529)) /locus_tag="GW7_17755" /product="C-type lectin domain family 1 member A" CDS complement(join(142063..142213,143641..143707, 149036..149134,160406..160529)) /locus_tag="GW7_17755" /note="GO_function: GO:0005488 - binding [Evidence IEA]" /codon_start=1 /product="C-type lectin domain family 1 member A" /protein_id="EHB07506.1" /db_xref="InterPro:IPR016187" /db_xref="UniProtKB/Swiss-Prot:Q8BWY2" /translation="MQAKYSSTRDMRGMLDDDEDTTLSLHSQASATTWQPEPRPTELR TPLSTWRPVALTLLTLCLVLLTGLAALGLVWLSRNGSGKTWLWMDGTPYSFELFEIII DTSLLRSRDCVTILNGKAFSKDCRELRRCACERTAGRVDPEKLH" assembly_gap 171964..172142 /estimated_length=179 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 172850..175482 /estimated_length=2633 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 175709..176135 /estimated_length=427 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<178307..>190582) /locus_tag="GW7_17756" mRNA complement(join(<178307..178433,182844..182962, 184362..184513,186968..187111,188234..188332, 190504..>190582)) /locus_tag="GW7_17756" /product="C-type lectin domain family 7 member A" CDS complement(join(<178307..178433,182844..182962, 184362..184513,186968..187111,188234..188332, 190504..>190582)) /locus_tag="GW7_17756" /note="GO_function: GO:0005488 - binding [Evidence IEA]; GO_function: GO:0005529 - sugar binding [Evidence IEA]" /codon_start=1 /product="C-type lectin domain family 7 member A" /protein_id="EHB07507.1" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR002353" /db_xref="InterPro:IPR013600" /db_xref="InterPro:IPR016187" /db_xref="UniProtKB/Swiss-Prot:Q9BXN2" /translation="DVDEDGYTKLNFHSRGATRRPVGSKKGSPVASPPWKLIAMILGI LCLVILVIAVVLSSLAFWRSNSRSNPLEKDNSLSRNKEHQTQPTKSSLEENVVSTKAL KTTGKGAVPSNCPPNWIVHEKSCYLLAISLDSWYGSKRRCSQLGSHLLKIDTLKEFDF IVEQMSSYAIHSFWIGLSRNQTEELWLWDDGSTFSYNLFQISSTATQENTAHNCVWIH VGNAYDQPCNIPSFSMCERLLS" assembly_gap 194961..196187 /estimated_length=1227 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 202541..202773 /estimated_length=233 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 204579..204699 /estimated_length=121 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 212098..213244 /estimated_length=1147 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 215500..215979 /estimated_length=480 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 216261..218227 /estimated_length=1967 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<223452..>235688) /locus_tag="GW7_17757" mRNA complement(join(<223452..223581,223888..224003, 224428..224567,228373..228618,233287..233388, 235613..>235688)) /locus_tag="GW7_17757" /product="Oxidized low-density lipoprotein receptor 1" CDS complement(join(<223452..223581,223888..224003, 224428..224567,228373..228618,233287..233388, 235613..235688)) /locus_tag="GW7_17757" /note="GO_function: GO:0005488 - binding [Evidence IEA]" /codon_start=1 /product="Oxidized low-density lipoprotein receptor 1" /protein_id="EHB07508.1" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR016187" /db_xref="UniProtKB/Swiss-Prot:P78380" /translation="MTFDDLKMKSMMDQPDQKSFGKKAKGLRLLSSPCWCPAAVTLGI LSLGLLVSLVLLREQLFQVSDLLKQYQANLTHQANILKGQLLAQQQAEKHCQNSQREL KNTINSLYQKVDEEAKEKMELHKQNLHLQEALERMENYSGPCPQDWIWHGENCYLFSS GMFNWEKSSKNCSALGAQLLKINNKGDLDFIREATSHSNLPFWMGLRLQKPRNSWLWE DGSPLRPHLFKLQGAFPNMYSPDTCAYLQRGDVFHENCILVAAPICQKAADL" assembly_gap 239754..239850 /estimated_length=97 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <243903..>250063 /locus_tag="GW7_17758" mRNA join(<243903..243956,246335..246378,247980..248018, 248507..248673,249819..>250063) /locus_tag="GW7_17758" /product="hypothetical protein" CDS join(243903..243956,246335..246378,247980..248018, 248507..248673,249819..250063) /locus_tag="GW7_17758" /codon_start=1 /product="hypothetical protein" /protein_id="EHB07509.1" /db_xref="UniProtKB/Swiss-Prot:Q0VBF2" /translation="MGVPTRVLMASGLACFTQLPGARCEESCVSPEHCLTTDWVHLWY IWLLVVVGVLLLLCGLTSVCFRCCLVRQQTGADESQPPYEVTVIAFDHDSTLQNTITS LQSRFGSAARRILAVTHSHSSLGQPPSSVDTLPGYDEALHMSRFTVARCGQKGPELSP VPEEKQLPPVEKESAGVEYPSL" assembly_gap 258859..259190 /estimated_length=332 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 259749..259791 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 260846..260883 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 267269..267468 /estimated_length=200 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 268242..269157 /estimated_length=916 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 270600..270687 /estimated_length=88 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 271530..271705 /estimated_length=176 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 272960..273090 /estimated_length=131 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 274485..274886 /estimated_length=402 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <276326..>283012 /locus_tag="GW7_17759" mRNA join(<276326..276409,280751..280829,281848..281966, 282947..>283012) /locus_tag="GW7_17759" /product="Gamma-aminobutyric acid receptor-associated protein-like 1" CDS join(276326..276409,280751..280829,281848..281966, 282947..283012) /locus_tag="GW7_17759" /codon_start=1 /product="Gamma-aminobutyric acid receptor-associated protein-like 1" /protein_id="EHB07510.1" /db_xref="InterPro:IPR004241" /db_xref="UniProtKB/Swiss-Prot:Q5BIZ2" /translation="MKFQYKEDHPFEYRKKEGEKIRKKYPDRVIVEKAPKARVPDLDK RKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYF LYVAYSDESVYGK" assembly_gap 276414..276634 /estimated_length=221 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 291651..294147 /estimated_length=2497 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 319515..319634 /estimated_length=120 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 321487..321833 /estimated_length=347 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <339644..>344176 /locus_tag="GW7_17760" mRNA join(<339644..339738,344056..>344176) /locus_tag="GW7_17760" /product="Natural killer cells antigen CD94" CDS join(<339644..339738,344056..344176) /locus_tag="GW7_17760" /codon_start=1 /product="Natural killer cells antigen CD94" /protein_id="EHB07511.1" /db_xref="UniProtKB/Swiss-Prot:Q9MZK9" /translation="SQITLWRLASRTFGVICLSMMVTLGILLKTSKLPLLPTPSPGYC IAYSPRKVTTSELCGIKNHYMCKQRPI" assembly_gap 361728..361909 /estimated_length=182 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 362231..365311 /estimated_length=3081 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <367859..>370740 /locus_tag="GW7_17761" mRNA join(<367859..368050,368804..368907,370623..>370740) /locus_tag="GW7_17761" /product="NKG2-D type II integral membrane protein" CDS join(367859..368050,368804..368907,370623..370740) /locus_tag="GW7_17761" /note="GO_function: GO:0005488 - binding [Evidence IEA]" /codon_start=1 /product="NKG2-D type II integral membrane protein" /protein_id="EHB07512.1" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR016187" /db_xref="UniProtKB/Swiss-Prot:Q9GLF5" /translation="MCTKLTIYLYIFLESYCGPCPKNWICYRNSCYQFSNESKNWYQS KASCQSQNSSLLKIYSKVDQDFFKFMKSYHWMGLEQIPENRSWHWEDVSVLSPDQLSM VEMQNGTCAVYASSFKGYTENCSTPNTYICMQQPI" assembly_gap 404902..407217 /estimated_length=2316 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 416191..416336 /estimated_length=146 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 421880..422019 /estimated_length=140 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 424398..424412 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 426247..433136 /estimated_length=6890 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 446265..451073 /estimated_length=4809 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 451461..452158 /estimated_length=698 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 458911..461335 /estimated_length=2425 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 477698..483098 /estimated_length=5401 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 484605..484635 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 504104..504123 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 511598..514278 /estimated_length=2681 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 521502..521736 /estimated_length=235 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 523115..524733 /estimated_length=1619 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<548529..>556771) /locus_tag="GW7_17762" mRNA complement(join(<548529..548691,551587..551693, 553011..553153,554282..554494,555476..555565, 556657..>556771)) /locus_tag="GW7_17762" /product="T-cell surface glycoprotein YE1/48" CDS complement(join(548529..548691,551587..551693, 553011..553153,554282..554494,555476..555565, 556657..556771)) /locus_tag="GW7_17762" /note="GO_function: GO:0005488 - binding [Evidence IEA]" /codon_start=1 /product="T-cell surface glycoprotein YE1/48" /protein_id="EHB07513.1" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR013600" /db_xref="InterPro:IPR016187" /db_xref="UniProtKB/Swiss-Prot:P20937" /translation="MSAEEVTYTTLRFLQSPSEAQNKLRPNATKGPREDDGKGFAVPW HLIAATLGIICLLLLMTVVVLVMEIFQEKNEKEKIRENLWQAQNDSSLKERLTNKTLE YDILKNEMHQKNTELELSSKKKCHRKNKTVSKPLQNKGKICEDDLTCCGVKCYYFIKE SKDWNGCKLTCQDYGLSPVKIDDRDELDFLRLQLGQCYYWIGLSFDTGENRWKWTESG ASPGINVRTMLPSSWEGKCAFLSATRISNIACSKTYNCICEKRMDGTFPASVCSEEER " assembly_gap 555603..555623 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 560036..560664 /estimated_length=629 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 560982..561128 /estimated_length=147 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 562335..562380 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<566567..>574701) /locus_tag="GW7_17763" mRNA complement(join(<566567..566666,568316..568398, 571268..571378,572014..572072,574608..>574701)) /locus_tag="GW7_17763" /product="mago nashi-like protein 2" CDS complement(join(566567..566666,568316..568398, 571268..571378,572014..572072,574608..574701)) /locus_tag="GW7_17763" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]" /codon_start=1 /product="mago nashi-like protein 2" /protein_id="EHB07514.1" /db_xref="InterPro:IPR004023" /db_xref="UniProtKB/Swiss-Prot:Q0VC92" /translation="MSMASDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKN DVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFT TSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFKIKPI" gene complement(<582270..>594478) /locus_tag="GW7_17764" mRNA complement(join(<582270..582474,583941..584037, 584685..584725,586515..586723,588845..588928, 590651..590832,591289..591555,593886..594020, 594415..>594478)) /locus_tag="GW7_17764" /product="Tyrosine-protein kinase STYK1" CDS complement(join(582270..582474,583941..584037, 584685..584725,586515..586723,588845..588928, 590651..590832,591289..591555,593886..594020, 594415..594478)) /locus_tag="GW7_17764" /note="GO_function: GO:0004672 - protein kinase activity [Evidence IEA]; GO_function: GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO_function: GO:0004713 - protein tyrosine kinase activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0006468 - protein phosphorylation [Evidence IEA]" /codon_start=1 /product="Tyrosine-protein kinase STYK1" /protein_id="EHB07515.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR020635" /db_xref="UniProtKB/Swiss-Prot:Q6J9G1" /translation="MGEKRGTARVLLECNLSDKTCLVQGEEYAVIIVPALLVGAFLVL LAVILWLFIRGQRSQRQRPGLRGIASMPASRSLTGAAEGCGEKVVMTLTETSVESFLR AVTPSLAKLQVPRDQLSEDLEQIHKGICGTTYRATVISGDPAKPKSVVLKALKEPAGL QEVKDFVGRIQFYQYLGKHQNLVHLEGCCTERLPVYMLLEDVAQGDLLSFLWTCRRDV MTMDGLLYDLTEKQVYHIGKQVLLALEFLQDKHLFHGDVAARNILIQSDLTAKLCGLG LAYEVHAQGAISTARTIPLKWLAPERLLLRPAGIRGDIWSFGILLYEMVTLGAPPYPE VPPPSILQYLQRGKIMKRPSSCTHTMYNIMKSCWHWSEDSRPLPGELRSRLEAATRTA DDKAVFQVPELVVPELYAAVAGISTESLSYCYSIL" assembly_gap 600194..600376 /estimated_length=183 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<606105..>656871) /locus_tag="GW7_17765" mRNA complement(join(<606105..606255,606566..606681, 623066..623362,638070..638244,640428..640525, 644547..644753,648255..648377,651608..651697, 654143..654176,656828..>656871)) /locus_tag="GW7_17765" /product="DNA-binding protein A" CDS complement(join(606105..606255,606566..606681, 623066..623362,638070..638244,640428..640525, 644547..644753,648255..648377,651608..651697, 654143..654176,656828..656871)) /locus_tag="GW7_17765" /note="GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_process: GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]" /codon_start=1 /product="DNA-binding protein A" /protein_id="EHB07516.1" /db_xref="InterPro:IPR002059" /db_xref="InterPro:IPR011129" /db_xref="InterPro:IPR016027" /db_xref="UniProtKB/Swiss-Prot:Q9JKB3" /translation="MKIGLALDKSVLSGLNDTKEDVFVHQTAIKKNNPRKYLRSVGDG ETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRGYYGRRRGPPRSYAGEE EEAGSGSSEGFEPRTADGQFSGAPGQLRQPQFYPRYRQRRFPPYHVGQSFDRRPRAFP QPSRMQAGEIGELKDGVPEGAQLQGPVHRNPTYRPRYRRGPPRPRPIVAPIGEAEDKE NQQAANGPNQPAARRGYRRPYNYRRRPRPPNAPSQDGKELPEVSSFSRPRSLLTPGEG GGPGPRFRLGDSDNVKRPKAAAVGRTAGDAVALPGGSVSACPGVSRTWPSSGRRCREE HEAPPPVQTECQQRFPPARVQRHQSGLTPPPAAGLLSGNPPTCSRRKGAPLTPRYAER GGWLSPPLCQRPVCQNRLEDWSENRTDLLTYGENRQENFKEPEVPLRRKSLG" assembly_gap 613513..614276 /estimated_length=764 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 622806..623050 /estimated_length=245 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 626710..626785 /estimated_length=76 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 641674..641691 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 649402..649452 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 656678..656688 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 657745..658428 /estimated_length=684 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 661255..661271 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 663921..663983 /estimated_length=63 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 665985..666022 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 670216..670227 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 674212..674418 /estimated_length=207 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 719827..719838 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 730310..736040 /estimated_length=5731 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<737360..>738298) /locus_tag="GW7_17766" mRNA complement(<737360..>738298) /locus_tag="GW7_17766" /product="Taste receptor type 2 member 7" CDS complement(737360..738298) /locus_tag="GW7_17766" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO_process: GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO_process: GO:0050909 - sensory perception of taste [Evidence IEA]" /codon_start=1 /product="Taste receptor type 2 member 7" /protein_id="EHB07517.1" /db_xref="InterPro:IPR007960" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/Swiss-Prot:Q646D6" /translation="MARKMERMLILSAVGEFSMGILGNTFIGLVSFMDWVKNRKIASI DLILMSLALSRICLLCAILLDCFILVVYPDIYDNNEKMRIIDFFWTLTNQLSVSFATC LSIFYFFKIANFFHPLFLWMKGRIHKVILWTLLVSLVLSVFISIPVTGNWNDNFRSCV KGRKKTNFTWRCGINDNLYASTKLILNLVTLFPFAVSLLSFLLLILSLWRHTRQMKLN ATGHRDPSTEAHIRALKSVISFLVLFIAYCLAFLIATSSYFMPETELAVIFGELIALI YPSSHSFILILGNNKLRQTSVKVLCKLKYILKGRKI" assembly_gap 744741..746429 /estimated_length=1689 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 746730..747302 /estimated_length=573 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 747645..748202 /estimated_length=558 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 748656..750138 /estimated_length=1483 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 751821..752213 /estimated_length=393 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 753485..753512 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 780893..781228 /estimated_length=336 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 786986..787001 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 794986..795174 /estimated_length=189 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 795396..800626 /estimated_length=5231 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 812761..813322 /estimated_length=562 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 815182..815225 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="unspecified" CONTIG join(AFSB01116418.1:1..268,gap(102),AFSB01116419.1:1..315,gap(25), AFSB01116420.1:1..32230,gap(166),AFSB01116421.1:1..2751,gap(380), AFSB01116422.1:1..13598,gap(2878),AFSB01116423.1:1..1706,gap(1789), AFSB01116424.1:1..4767,gap(122),AFSB01116425.1:1..8843,gap(2723), AFSB01116426.1:1..39151,gap(202),AFSB01116427.1:1..12238,gap(112), AFSB01116428.1:1..47597,gap(179),AFSB01116429.1:1..707,gap(2633), AFSB01116430.1:1..226,gap(427),AFSB01116431.1:1..18825,gap(1227), AFSB01116432.1:1..6353,gap(233),AFSB01116433.1:1..1805,gap(121), AFSB01116434.1:1..7398,gap(1147),AFSB01116435.1:1..2255,gap(480), AFSB01116436.1:1..281,gap(1967),AFSB01116437.1:1..21526,gap(97), AFSB01116438.1:1..19008,gap(332),AFSB01116439.1:1..558,gap(43), AFSB01116440.1:1..1054,gap(38),AFSB01116441.1:1..6385,gap(200), AFSB01116442.1:1..773,gap(916),AFSB01116443.1:1..1442,gap(88), AFSB01116444.1:1..842,gap(176),AFSB01116445.1:1..1254,gap(131), AFSB01116446.1:1..1394,gap(402),AFSB01116447.1:1..1527,gap(221), AFSB01116448.1:1..15016,gap(2497),AFSB01116449.1:1..25367,gap(120), AFSB01116450.1:1..1852,gap(347),AFSB01116451.1:1..39894,gap(182), AFSB01116452.1:1..321,gap(3081),AFSB01116453.1:1..39590,gap(2316), AFSB01116454.1:1..8973,gap(146),AFSB01116455.1:1..5543,gap(140), AFSB01116456.1:1..2378,gap(15),AFSB01116457.1:1..1834,gap(6890), AFSB01116458.1:1..13128,gap(4809),AFSB01116459.1:1..387,gap(698), AFSB01116460.1:1..6752,gap(2425),AFSB01116461.1:1..16362,gap(5401), AFSB01116462.1:1..1506,gap(31),AFSB01116463.1:1..19468,gap(20), AFSB01116464.1:1..7474,gap(2681),AFSB01116465.1:1..7223,gap(235), AFSB01116466.1:1..1378,gap(1619),AFSB01116467.1:1..30869,gap(21), AFSB01116468.1:1..4412,gap(629),AFSB01116469.1:1..317,gap(147), AFSB01116470.1:1..1206,gap(46),AFSB01116471.1:1..37813,gap(183), AFSB01116472.1:1..13136,gap(764),AFSB01116473.1:1..8529,gap(245), AFSB01116474.1:1..3659,gap(76),AFSB01116475.1:1..14888,gap(18), AFSB01116476.1:1..7710,gap(51),AFSB01116477.1:1..7225,gap(11), AFSB01116478.1:1..1056,gap(684),AFSB01116479.1:1..2826,gap(17), AFSB01116480.1:1..2649,gap(63),AFSB01116481.1:1..2001,gap(38), AFSB01116482.1:1..4193,gap(12),AFSB01116483.1:1..3984,gap(207), AFSB01116484.1:1..45408,gap(12),AFSB01116485.1:1..10471,gap(5731), AFSB01116486.1:1..8700,gap(1689),AFSB01116487.1:1..300,gap(573), AFSB01116488.1:1..342,gap(558),AFSB01116489.1:1..453,gap(1483), AFSB01116490.1:1..1682,gap(393),AFSB01116491.1:1..1271,gap(28), AFSB01116492.1:1..27380,gap(336),AFSB01116493.1:1..5757,gap(16), AFSB01116494.1:1..7984,gap(189),AFSB01116495.1:1..221,gap(5231), AFSB01116496.1:1..12134,gap(562),AFSB01116497.1:1..1859,gap(44), AFSB01116498.1:1..8953) //