LOCUS JH167571 1498271 bp DNA linear CON 14-MAR-2015 DEFINITION Heterocephalus glaber unplaced genomic scaffold scaffold2652, whole genome shotgun sequence. ACCESSION JH167571 AFSB01000000 VERSION JH167571.1 DBLINK BioProject: PRJNA68323 BioSample: SAMN00217190 KEYWORDS WGS. SOURCE Heterocephalus glaber (naked mole-rat) ORGANISM Heterocephalus glaber Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus. REFERENCE 1 (bases 1 to 1498271) AUTHORS Kim,E.B., Fang,X., Fushan,A.A., Huang,Z., Lobanov,A.V., Han,L., Marino,S.M., Sun,X., Turanov,A.A., Yang,P., Yim,S.H., Zhao,X., Kasaikina,M.V., Stoletzki,N., Peng,C., Polak,P., Xiong,Z., Kiezun,A., Zhu,Y., Chen,Y., Kryukov,G.V., Zhang,Q., Peshkin,L., Yang,L., Bronson,R.T., Buffenstein,R., Wang,B., Han,C., Li,Q., Chen,L., Zhao,W., Sunyaev,S.R., Park,T.J., Zhang,G., Wang,J. and Gladyshev,V.N. TITLE Genome sequencing reveals insights into physiology and longevity of the naked mole rat JOURNAL Nature 479 (7372), 223-227 (2011) PUBMED 21993625 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 1498271) AUTHORS Kim,E.B., Fang,X., Fushan,A., Huang,Z., Lobanov,A., Han,L., Marino,S., Sun,X., Turanov,A., Yang,P., Yim,S.H., Zhao,X., Kasaikina,M., Stoletzki,N., Peng,C., Polak,P., Xiong,Z., Kiezun,A., Zhu,Y., Chen,Y., Kryukov,G., Zhang,Q., Peshkin,L., Yang,L., Bronson,R., Wang,B., Han,C., Li,Q., Chen,L., Zhao,W., Sunyaev,S., Park,T., Zhang,G., Wang,J. and Gladyshev,V. TITLE Direct Submission JOURNAL Submitted (12-JUL-2011) Department of Science and Technology, Beijing Genomics Institute, Shenzhen, 2nd Office Building, Beishan Industrial Zone, Beishan Road, Yantian District, Shenzhen, Guangdong 518083, China COMMENT Source DNA is available from laboratory of Thomas Park at University of Illinois at Chicago. ##Genome-Assembly-Data-START## Assembly Method :: SOAPdenovo v. 1.05 Assembly Name :: HetGla_1.0 Genome Coverage :: 90x Sequencing Technology :: Illumina HiSeq 2000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..1498271 /organism="Heterocephalus glaber" /mol_type="genomic DNA" /submitter_seqid="scaffold2652" /db_xref="taxon:10181" /chromosome="Unknown" /sex="male" assembly_gap 403..835 /estimated_length=433 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3096..3438 /estimated_length=343 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4602..5759 /estimated_length=1158 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 11264..11301 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 16835..21494 /estimated_length=4660 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 30479..30549 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 61184..62306 /estimated_length=1123 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 77915..78338 /estimated_length=424 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 80064..80294 /estimated_length=231 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <100891..>143094 /locus_tag="GW7_11194" mRNA join(<100891..101024,119116..119216,120069..120118, 122883..122975,130752..130845,132222..132406, 135729..135911,139107..139250,142423..142449, 143005..>143094) /locus_tag="GW7_11194" /product="F-box only protein 25" CDS join(100891..101024,119116..119216,120069..120118, 122883..122975,130752..130845,132222..132406, 135729..135911,139107..139250,142423..142449, 143005..143094) /locus_tag="GW7_11194" /codon_start=1 /product="F-box only protein 25" /protein_id="EHB02133.1" /db_xref="InterPro:IPR022364" /db_xref="UniProtKB/Swiss-Prot:Q8TCJ0" /translation="MPFLGQDWRSPGWSWIKTEDGWKRCDSLSQELERENSQCTVTHG LILNSEDEIFSNEECEYASKKRKKDHFRNDTNAQSFYREKWIYVHKESTRERHGYCTL GEAFNRLDFSSAIQDIRRFTYVVKLLQLIAKSQLTSLSGVAQKNYFNVLDKIVQKVLD DHQNPRLIKDLLQDLSSTLCILIRGVGKSVLVGNINIWICRLETVLGWQQQLQNLQMT KHVNSGLTLSDLPLHMLNNILYRFSDGWDIVTLGQVTPTLYVLSEDRQLWKKLCQYHF AEQQFCRHLILSEKGHIEWKLMYFTLQKYYPTKEQYGDTLHFCRHCSILFWKDYHLAW LFKDSGHPCTAADPDSCFTPVSPQHFIDLFKF" assembly_gap 102854..103646 /estimated_length=793 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 105054..105137 /estimated_length=84 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 108342..108754 /estimated_length=413 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 138524..138667 /estimated_length=144 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<157239..>161234) /locus_tag="GW7_11195" mRNA complement(join(<157239..157527,161131..>161234)) /locus_tag="GW7_11195" /product="hypothetical protein" CDS complement(join(<157239..157527,161131..>161234)) /locus_tag="GW7_11195" /codon_start=1 /product="hypothetical protein" /protein_id="EHB02134.1" /db_xref="UniProtKB/Swiss-Prot:Q86YL5" /translation="VQGTSFRGWKDVTSLFNKDDEQHLLERCKSPKSKGTNLRLKEDL KSEKKSGFWDNLVLKQNTQSKKPDEIEGWEPPRLAFEDMAADSEDASSDCQRWSGWEG DAKGSSKYTSLSSSAASSRWSLRSAGKLV" assembly_gap 165197..165365 /estimated_length=169 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 178306..178683 /estimated_length=378 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 186103..187131 /estimated_length=1029 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 187838..188852 /estimated_length=1015 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 191433..191786 /estimated_length=354 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 212541..215114 /estimated_length=2574 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 218249..218267 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 236354..236949 /estimated_length=596 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 237336..237726 /estimated_length=391 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 237976..238813 /estimated_length=838 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 240682..241165 /estimated_length=484 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 241875..242070 /estimated_length=196 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 244876..245678 /estimated_length=803 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 258682..269004 /estimated_length=10323 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 269978..270202 /estimated_length=225 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 272690..275069 /estimated_length=2380 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 284779..284789 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 291770..292004 /estimated_length=235 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 294228..294245 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<300086..>359336) /locus_tag="GW7_11196" mRNA complement(join(<300086..300159,304355..304549, 307201..307668,333858..333995,359189..>359336)) /locus_tag="GW7_11196" /product="Glutamate-rich protein 1" CDS complement(join(300086..300159,304355..304549, 307201..307668,333858..333995,359189..>359336)) /locus_tag="GW7_11196" /codon_start=1 /product="Glutamate-rich protein 1" /protein_id="EHB02135.1" /db_xref="UniProtKB/Swiss-Prot:Q86X53" /translation="VFVEKVLKKLFPNVSSSQEKETPGTLTSETPLKKVTSEGVKYKH VHHLTDGSDIKAQPHRHLYTVSLPPEGHVPFCPAPSTGADSETACSADDAEDQDPHDQ PKKRIRKHKLKKKFKNSNNVRVDQAELEEQQSLLQEKLQPQHTDGPTISKNRKRKLKK KQQIRRKKAAGLVTKAFSASFTYQPEENGSEQEDVPGAAGDGGPRAMEEARGEAITEH NTAPSQEDEEIANRKAGGILNFLKLMQEMYFYDGVSKDMDSAVRVETAEELLRCLESH RMAPSDVLILDHMKTLLLLHDTARLQRALELLPEHCEMPLDHARVISAFFNYWITHVF PEKNSE" assembly_gap 314059..314075 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 328255..329130 /estimated_length=876 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 329425..330019 /estimated_length=595 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 346105..350121 /estimated_length=4017 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 360140..360260 /estimated_length=121 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 379338..379418 /estimated_length=81 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 381725..381737 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 388326..388963 /estimated_length=638 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 399343..400817 /estimated_length=1475 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 439206..439627 /estimated_length=422 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <449207..>451005 /locus_tag="GW7_11197" mRNA join(<449207..449572,450754..>451005) /locus_tag="GW7_11197" /product="Polyadenylate-binding protein 4" CDS join(449207..449572,450754..451005) /locus_tag="GW7_11197" /note="GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0003723 - RNA binding [Evidence IEA]" /codon_start=1 /product="Polyadenylate-binding protein 4" /protein_id="EHB02136.1" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR002004" /db_xref="UniProtKB/Swiss-Prot:Q13310" /translation="MNAAVRSYPVASLSVGDLHSDAAEAVLYEKFSRAGPVLPIRVCG DVITRRSLGHAYVSFQQPAEAERALDTMNFDGIKGKQIYIMWPQKDPSLTKSGVGNVF IKNLDKSIDNKALYDTFSALEQSRCSENVCSPSSKQGIRAWLASSQALEMDNSELLHT LESPKSLHSKVDEAVAVLQAHHAKKEAARRWALLLLLPLRQGKHD" assembly_gap 452883..452902 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 476248..477083 /estimated_length=836 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 477428..477782 /estimated_length=355 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 478258..482827 /estimated_length=4570 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 483386..484418 /estimated_length=1033 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 487938..488103 /estimated_length=166 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 500261..500570 /estimated_length=310 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 505289..505324 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 538472..538723 /estimated_length=252 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 553835..559814 /estimated_length=5980 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 571433..571499 /estimated_length=67 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 615180..615203 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<622859..>661003) /locus_tag="GW7_11198" mRNA complement(join(<622859..623178,660854..660895, 660916..>661003)) /locus_tag="GW7_11198" /product="hypothetical protein" CDS complement(join(<622859..623178,660854..660895, 660916..>661003)) /locus_tag="GW7_11198" /codon_start=1 /product="hypothetical protein" /protein_id="EHB02137.1" /translation="TCTRKCTDAHAHKQVHTHVHTQAQIDTHVDTHVHTDVHTHRCAE SISPCVSTHTHTHTHTHTRRHMHTGTHRHTCRHTQMHTHMQAHLHTGAHAGTHTLTCM CTHICTHTTCKTHMQTHTHPHPCMHTHTHRYTGVHTHAHTHAHMYAHV" assembly_gap 626554..626617 /estimated_length=64 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 635749..637361 /estimated_length=1613 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 700810..701263 /estimated_length=454 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 707005..707237 /estimated_length=233 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 713321..713372 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <715408..>929057 /locus_tag="GW7_11199" mRNA join(<715408..715441,822044..822109,841344..842413, 856097..856308,877864..878011,881873..882092, 899663..900015,900733..900774,907044..907129, 908421..908836,923324..923415,926363..926515, 928839..>929057) /locus_tag="GW7_11199" /product="Disks large-associated protein 2" CDS join(<715408..715441,822044..822109,841344..842413, 856097..856308,877864..878011,881873..882092, 899663..900015,900733..900774,907044..907129, 908421..908836,923324..923415,926363..926515, 928839..929057) /locus_tag="GW7_11199" /note="GO_process: GO:0007267 - cell-cell signaling [Evidence IEA]" /codon_start=1 /product="Disks large-associated protein 2" /protein_id="EHB02138.1" /db_xref="InterPro:IPR005026" /db_xref="UniProtKB/Swiss-Prot:Q8BJ42" /translation="ESQCTLCGEPEEEEGGDLAQPGLSFPGPAEEDLDQQYSWSPTQH FNEERYSPVPRNMKGLSGSRNQPQLCAGHTCGLTPPDDCEHPRDHLRHGQDMRQPYLL SPAESCPLDHHRCSPRSSVHSECVMMPMVLGDHVSSSTFPRMHYSSHYDTRDDCTMSH ASTKANRIPANLLDQFEKQLPLHRDGFHTLQYQRAPATPEQRSESPGRIRHLVHSVQK LFTKSHSLEGSSKGNVNGTKGDSRGDDHHHGHPSKHSKRSKSKDHKPEGKHKSGLSSW WSSDDNLDSDSTYRPPSVAKRHHMDHLAHCYPEALPSPFGDLSLKPSKSNNDVKCSAC EGLALTPDAKYMKRSSWSTLTVSQAKEAYRKSSLNLDKPLAHPEVKPALRPCHYLQVP QDEWGGYPPGGKDDEIPCRRMRSGSYIKAMGDEESGESDSSPKTSPTVALRPEPLLKP IPQRPLGDHQTQSYLQAASEVPVGHSLDPAANYNSLKFRSRNQSYMRAVSTLSQASCV SQMSEAEMNGQFESVCESVFSEVESQAMDALDLPGCFRTRSHSYLRAIQAGYSQDDEC ILSMMPSNVTSTIRSSAAVSYPNYKKTPPPVPPRTTSKPLISVTAQSSTESTQDAYQD SRAQRMSPWPQDGRSLYNSTDSLDSNKAMNLALETAAAQRHADSQGGSMRPGDKAILT SKAEELLKSRCASISIGVQDSEFPDLQPYPRSDVETATDSDTESRGLREYHSVGVQVE DEKRHGRFKRSNSVTAAVQADLELEGFPDHITMEDKGLQFGSSFQRHSEPSTPTQYGA VRTVRTQGLFSYREDYRTQADTASLPAPEPWLESTLEPVETGRMSPCRGDGSWFLKLL HTETERMEAWCKEMEREAEENDLAEEILGKIRSAVGSAQLLMSQKFQQFYWLCQQNMD PSAMPRPTSQDLAGYWDMLQLSVEDVSMKFDELHQLKLNDWRVMESPEREEERKVPPP IPKKPPKGKFPITREKSLDLPDRQRQEARRRLMAAKRAASFRQNSATERADSIEIYIP EAQTRL" assembly_gap 736579..736659 /estimated_length=81 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 747751..747778 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 766952..767031 /estimated_length=80 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 809606..809654 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 833442..837576 /estimated_length=4135 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 888219..888323 /estimated_length=105 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 897407..897439 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 901300..902077 /estimated_length=778 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 903595..903924 /estimated_length=330 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 910231..910284 /estimated_length=54 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 910661..911220 /estimated_length=560 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 911696..912235 /estimated_length=540 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 912989..913804 /estimated_length=816 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 914191..914581 /estimated_length=391 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 929247..931327 /estimated_length=2081 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <935243..>952629 /locus_tag="GW7_11200" mRNA join(<935243..935435,937765..937911,952161..952221, 952497..>952629) /locus_tag="GW7_11200" /product="hypothetical protein" CDS join(935243..935435,937765..937911,952161..952221, 952497..952629) /locus_tag="GW7_11200" /codon_start=1 /product="hypothetical protein" /protein_id="EHB02139.1" /translation="MGVPWGLVLAVLLHGGLTASLGQPGDGEVMVRAFFAAGFHLSFW RLPRTVSTCPTKQAVVPHHARAIAAAGLPEDGPPVPGSSTMLNRPPSPALPQHLQAQD AGRETAGDRDDETNDKQDPKRFVCPQPVSLRRDNGNTEGDQSSFGDASLDLLLKAGPL DLTVIQMSAMCHLALSI" assembly_gap 949474..949488 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 955508..955945 /estimated_length=438 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <962935..>968429 /locus_tag="GW7_11201" mRNA join(<962935..963477,968106..>968429) /locus_tag="GW7_11201" /product="Protein CLN8" CDS join(962935..963477,968106..968429) /locus_tag="GW7_11201" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]" /codon_start=1 /product="Protein CLN8" /protein_id="EHB02140.1" /db_xref="InterPro:IPR006634" /db_xref="UniProtKB/Swiss-Prot:Q9UBY8" /translation="MTSDSDGGSSQGIFDLDYVSWKIRSTLVVAGFVFYLGVFVVCHQ LSSSLNATYRSLVAREKVFWDLAATRAVFGVQSTFAGLWALLGDPVLQADKALGQQNW CWFHVTTATGFFFFENVAVYLSSLFFRTFDLFLVVHHLFAFLGFLGSAVNLRAGHYLA MITLLLEMSTPFTCISWMLLKAGWSSTLLWKANQWLMIHMFHCRMVLTYHMWWVCFWY WDGLLSSLYLPHFALFLVGLALLTLVMNPYWTHKKTQQLLSPVDWNFAQPETKNSRPD RPGGHVLQKKRP" assembly_gap 968949..969501 /estimated_length=553 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 998860..998873 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <1001734..>1078485 /locus_tag="GW7_11202" mRNA join(<1001734..1001908,1002376..1002660,1005118..1005184, 1006769..1006845,1008858..1008914,1015088..1015255, 1016364..1016370,1017070..1017184,1018560..1018674, 1020691..1020797,1026894..1026971,1027215..1027394, 1029047..1029163,1030463..1030555,1033528..1033698, 1035206..1035351,1036948..1037123,1054831..1054946, 1055268..1055395,1055531..1055631,1056909..1057030, 1061701..1061787,1063057..1063280,1064473..1064630, 1068322..1068464,1075651..1075825,1076698..1076820, 1077977..>1078485) /locus_tag="GW7_11202" /product="Rho guanine nucleotide exchange factor 10" CDS join(<1001734..1001908,1002376..1002660,1005118..1005184, 1006769..1006845,1008858..1008914,1015088..1015255, 1016364..1016370,1017070..1017184,1018560..1018674, 1020691..1020797,1026894..1026971,1027215..1027394, 1029047..1029163,1030463..1030555,1033528..1033698, 1035206..1035351,1036948..1037123,1054831..1054946, 1055268..1055395,1055531..1055631,1056909..1057030, 1061701..1061787,1063057..1063280,1064473..1064630, 1068322..1068464,1075651..1075825,1076698..1076820, 1077977..>1078485) /locus_tag="GW7_11202" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA]" /codon_start=1 /product="Rho guanine nucleotide exchange factor 10" /protein_id="EHB02141.1" /db_xref="InterPro:IPR000219" /db_xref="InterPro:IPR011046" /db_xref="UniProtKB/Swiss-Prot:O15013" /translation="ENEVKYDTSNKEAEEGEQFDFDSGDEVPEADRQAPPQPGAWGAG GGAAQGPASASPEEGGDKGPGAEAFEVAEPAKLLVPKVNPYSVIDITPLQEDALPPPD PATEEDGVGPHVPSGYLVPVPCGYAVPSSLPMLLPAYSSPVIIRTESVDEEAEAPEVV GDHQSHSLSSEDPLLSGDQSSREDSALARWAVDPANTAWMENPEEAIYDDVPRENSDS EPDGMLYDDVENGEQGGNSSVEYGWSSSEFESYEEQSDSECRSGVPRPFLRSSHRKQV ASSSHDLSRLKARCEESMRDLVASTVRAMGVQQLTCRQECKMQKLMKAAKEGTRDGLE RTKAAVKRGRSFIRTKSFVSPDHRSCLEEEQSLFIDVDCRHPEAVLTPMPEGLSQQQV VRRYILGSIVESEKNYVDALKRILEQYEKPLSEMEPRVLSERKLKMVFYRVKEILQCH SMFQIALASRVAEWDAVETIGDVFVASFSKSMVLDAYSEYVNNFGTAVAILKKTCATK PTFLEFLKQSQEASPDRVTLCSLMMKPIQRFPQFILLLQDMLKNTPRGHPDRLPLQMA LTELETLAEKLNERKRDADQRCEIKHIAKAINERYLNKLLCSGSRRLIRSDDVIETVY NDKGEITKTKERRLLMLNDVLMCATVSFRPSQESHVGASQRYLLKWSVPLGHVEVMEY SNGPGIGEHSRHPAVHPPESLAVSANAKPYKTYLGPGQLYHDLQNLLHDLNVVGQIAQ LIGSLRGNYQNLNQSVAHDWTSGLQSLILKKEDEIRAADRCRIQLQLPGKQDKSGRPT FFTAVFNTFTPAIKEAWTSNLQMAKLALEEDNHLGWFCVDDDGSQTKRDTHPLLVGHM PVMVARQPEFKIECAAYNPEPYLNNESQRDSLSMARGFLWIGSCSSQMGQIAIISFQN SSPKVIECFNVESRILCMVYVPVQEQHREPSAASDPEPLTTHTSDVPTICLGTEEGSI SVYKSSQGSKKVRLQHFFSPEKSTVVSLASSPRGLHAGLVNGSVASYAKAADGSWNVE PQKVIDLGVLPVRSLLVMEDTLWAASGGQVFIIGTETHAVQSQLEAHQEEGMVISHMA VAGVGLWVAFTTGSTLRLFHTETLKHLQDVNIAAPVHGMLPGHQRLSVTSLLVCHGLL MVGTSLGLVVALPVPRLQGIPKVTGRGMVSYHAHSGPVKFIVLATASPKDKDKARDSP PPGPEPPDEEQKDEPSGDRATSCPGQGDLTTAIWLGDWPGPGLQKSDLSSSSGSLSLS HGSNSLELRAEDSSMCDFLRDPAGPVRGRARPSRRAKASSALVVCGGQGHRRMHRKAR APPPEELLSSVMVWQIPLLS" assembly_gap 1005628..1005681 /estimated_length=54 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1014837..1014854 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1024314..1024996 /estimated_length=683 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1025704..1026070 /estimated_length=367 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1037405..1037960 /estimated_length=556 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1057151..1057201 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1059227..1059883 /estimated_length=657 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1068718..1068848 /estimated_length=131 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1074036..1074255 /estimated_length=220 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1086416..1087059 /estimated_length=644 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <1097840..>1174659 /locus_tag="GW7_11203" mRNA join(<1097840..1098105,1100879..1101021,1105864..1105956, 1118182..1118254,1123990..1124106,1125222..1125353, 1128964..1129102,1129186..1129343,1130246..1130338, 1135474..1135562,1135639..1135689,1137309..1137473, 1139350..1139511,1140906..1141047,1142875..1143074, 1143518..1143571,1145742..1145869,1148596..1148779, 1149700..1149874,1150830..1150935,1152003..1152127, 1152363..1152477,1153724..1153850,1155126..1155304, 1155885..1155999,1156947..1157103,1157187..1157293, 1158589..1158633,1159058..1159194,1160002..1160146, 1160260..1160319,1161771..1161838,1164499..1164612, 1164783..1164870,1165324..1165362,1167394..1167499, 1170056..1170406,1171366..1171529,1171758..1171794, 1172778..1172800,1173173..1173228,1174348..>1174659) /locus_tag="GW7_11203" /product="Myomesin-2" CDS join(1097840..1098105,1100879..1101021,1105864..1105956, 1118182..1118254,1123990..1124106,1125222..1125353, 1128964..1129102,1129186..1129343,1130246..1130338, 1135474..1135562,1135639..1135689,1137309..1137473, 1139350..1139511,1140906..1141047,1142875..1143074, 1143518..1143571,1145742..1145869,1148596..1148779, 1149700..1149874,1150830..1150935,1152003..1152127, 1152363..1152477,1153724..1153850,1155126..1155304, 1155885..1155999,1156947..1157103,1157187..1157293, 1158589..1158633,1159058..1159194,1160002..1160146, 1160260..1160319,1161771..1161838,1164499..1164612, 1164783..1164870,1165324..1165362,1167394..1167499, 1170056..1170406,1171366..1171529,1171758..1171794, 1172778..1172800,1173173..1173228,1174348..1174659) /locus_tag="GW7_11203" /codon_start=1 /product="Myomesin-2" /protein_id="EHB02142.1" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR003961" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR008957" /db_xref="InterPro:IPR013098" /db_xref="InterPro:IPR013151" /db_xref="UniProtKB/Swiss-Prot:P54296" /translation="MENSVAPCILYPGEDRARGAPGEGSLPPPDAAAGEGAASASPSP AQTPCSLRASLCFSSGDESPPQSRAAAAAEQDPGACPPSRVVEPRYVQEKLLFAKIKD RTRLPTRHGGVGSKSSTLLALIGEDSLRGHAENTGPQVPRGPQWVCLTLAWLSLEAAP GPSPGSPELLQPTELIGIPSVETSGHNWQRAGALNMSLVAMPFYQKRHKHFDQSYRNV QTRYLLDEYASKKRASMQSSTQSYLAQKSSAQRAASRTSAAATSVSTREEEQEDEHRY RSLEAAYGEAKRQRFLSELTQLEEDVSLARTHTRSMLDKYALQQAVDAQKVWEWHDFE ERMRRAPEILVRLRSHTVWERMSVTLCFTVQGFPTPVVQWYKNGSLICQAGEPGKYLI ESRYGVHTLQINRANFDDSATYSAVATNVHGQVSTNAAVVVKRFRGDEEPFHSVGLPI GLPLSAVIPYTHFDVQFLEKFGVTFRREGETLTLKCTVLVTPDLKRVQPRAEWYRDDV LLQESKWTKMFFGEGQASLSFSHLNKDDEGLYTLRIVSRGGVSDHSAFLFVRDADPLV TGAPGAPMDLECHDANRDYVIVTWKPPNTTTESPVIGYFIDRCEVGTDNWVQCNDAPV KTCKYPVTGLFEGRSYLFRVRAVNSAGISRPSRVSVAVAALDPVDLRRLQAVHLEGEK PTVISKDDLEGDVQIPGAPTDVHASEISRTYVVLSWEPPTPRGKESLLYFIEKSVVGS GTWQRVNAQMGVKSPRFAVFDLADGKSYVFRVLSANKHGLSDPSETTPPIQAQDSIVV PSAPGRVQASRNTKTSVVVQWDQPKHAEDLLGYYVDCCVAGTNRWEPCNHKPIGYNRF VVHGLTTGEQYVFRVKAVNAVGTSENSQESDVIKVTHPTPSRRWTVGRCPEKGSECDG SRHPGPSPRLPLCSPLARCQFSGGTPILGYYVDKREAQHKNWHEVNASLLQDRILTVE GLTEGSLYEFKITATNVAGIGQPSDPSKLFKCEAWTAPEPGPAYDLTFCEVRDTSLVV LWKPPVYPGSSPVSGYFVDCKEVDAGEWKTVNQATAPNRYLKVCDLQRGQTYVFRVRA VNTSGPGKPSDASEPVLVEARPGTKEMSAGVDEEGNIYLGFDCQEMTDASQFTWCKSY EEIADGDRFRVHTEGDHSRLYFKDPDQVDVGTYSVSVSDTDGVSSSFVLDEEELARLM ALSNEIKNPTVPLKSELAYEIFDKGQVRFWLQAEHLSPDANFRVVINDREVSDSATHR IKCDKSTGLIEMVMDRFTFENEGTYTVQIHDGKAKNQSSLVLIGDAFKAVLEEAEFQR KEFLRKQGPHFSEYLHWDVTEECEVRLVCKVANTKKETVFKWLKDDVLYETEKLPDLE KGVCELLIPKLSKRDHGEYKATLKDDRGQDVSVLEIAGKVYEDMILAMSRVCGVSASP LKILCTPEGIRLQCFMKYFTEEMKVTWYHNTVSVLCCPALMRHGRGSSRAERLPGGTL GSPSHSGATASGLAAAELGAWLRLHHLELSLERLPGCVAAPWSPGSTIKADPSLVALR TEFLDQCPSAAHGQEEGPSVNRVSAQRLVHLEAKVSSSEHMRVGGSEEMAWLQICEPT EKDKGKYTFEISDGKDNHHRSLDFSGQAFDEAFAEFQQLKAAAFAEKNRGKVIGGLPD VVTIMEGKTLNLTCTVFGNPDPEVVWFKNDKDIQLSEHFSVKVEQAKYVSMTITGVTS EDSGKYSIHVRNKYGGEKIDVTVSVYKHGEKIPDIVPPQQAKPKLIPASTSAE" assembly_gap 1098289..1099664 /estimated_length=1376 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1108640..1108650 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1114662..1114792 /estimated_length=131 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1146590..1147121 /estimated_length=532 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1152214..1152352 /estimated_length=139 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1154439..1154455 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1169409..1169473 /estimated_length=65 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1181925..1182431 /estimated_length=507 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1191015..1191306 /estimated_length=292 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1234787..1234796 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1287885..1287915 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1296738..1296755 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1322753..1324987 /estimated_length=2235 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1332660..1332671 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1356227..1359195 /estimated_length=2969 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1360117..1360127 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1379319..1379762 /estimated_length=444 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1383359..1383384 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1387729..1387780 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1403476..1403488 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1405137..1405146 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1414904..1414918 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1424827..1424958 /estimated_length=132 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1461721..1461910 /estimated_length=190 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1478745..1478898 /estimated_length=154 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1485517..1486908 /estimated_length=1392 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1492919..1493061 /estimated_length=143 /gap_type="within scaffold" /linkage_evidence="unspecified" CONTIG join(AFSB01056166.1:1..402,gap(433),AFSB01056167.1:1..2260, gap(343),AFSB01056168.1:1..1163,gap(1158),AFSB01056169.1:1..5504, gap(38),AFSB01056170.1:1..5533,gap(4660),AFSB01056171.1:1..8984, gap(71),AFSB01056172.1:1..30634,gap(1123),AFSB01056173.1:1..15608, gap(424),AFSB01056174.1:1..1725,gap(231),AFSB01056175.1:1..22559, gap(793),AFSB01056176.1:1..1407,gap(84),AFSB01056177.1:1..3204, gap(413),AFSB01056178.1:1..29769,gap(144),AFSB01056179.1:1..26529, gap(169),AFSB01056180.1:1..12940,gap(378),AFSB01056181.1:1..7419, gap(1029),AFSB01056182.1:1..706,gap(1015),AFSB01056183.1:1..2580, gap(354),AFSB01056184.1:1..20754,gap(2574),AFSB01056185.1:1..3134, gap(19),AFSB01056186.1:1..18086,gap(596),AFSB01056187.1:1..386, gap(391),AFSB01056188.1:1..249,gap(838),AFSB01056189.1:1..1868, gap(484),AFSB01056190.1:1..709,gap(196),AFSB01056191.1:1..2805, gap(803),AFSB01056192.1:1..13003,gap(10323),AFSB01056193.1:1..973, gap(225),AFSB01056194.1:1..2487,gap(2380),AFSB01056195.1:1..9709, gap(11),AFSB01056196.1:1..6980,gap(235),AFSB01056197.1:1..2223, gap(18),AFSB01056198.1:1..19813,gap(17),AFSB01056199.1:1..14179, gap(876),AFSB01056200.1:1..294,gap(595),AFSB01056201.1:1..16085, gap(4017),AFSB01056202.1:1..10018,gap(121),AFSB01056203.1:1..19077, gap(81),AFSB01056204.1:1..2306,gap(13),AFSB01056205.1:1..6588, gap(638),AFSB01056206.1:1..10379,gap(1475),AFSB01056207.1:1..38388, gap(422),AFSB01056208.1:1..13255,gap(20),AFSB01056209.1:1..23345, gap(836),AFSB01056210.1:1..344,gap(355),AFSB01056211.1:1..475, gap(4570),AFSB01056212.1:1..558,gap(1033),AFSB01056213.1:1..3519, gap(166),AFSB01056214.1:1..12157,gap(310),AFSB01056215.1:1..4718, gap(36),AFSB01056216.1:1..33147,gap(252),AFSB01056217.1:1..15111, gap(5980),AFSB01056218.1:1..11618,gap(67),AFSB01056219.1:1..43680, gap(24),AFSB01056220.1:1..11350,gap(64),AFSB01056221.1:1..9131, gap(1613),AFSB01056222.1:1..63448,gap(454),AFSB01056223.1:1..5741, gap(233),AFSB01056224.1:1..6083,gap(52),AFSB01056225.1:1..23206, gap(81),AFSB01056226.1:1..11091,gap(28),AFSB01056227.1:1..19173, gap(80),AFSB01056228.1:1..42574,gap(49),AFSB01056229.1:1..23787, gap(4135),AFSB01056230.1:1..50642,gap(105),AFSB01056231.1:1..9083, gap(33),AFSB01056232.1:1..3860,gap(778),AFSB01056233.1:1..1517, gap(330),AFSB01056234.1:1..6306,gap(54),AFSB01056235.1:1..376, gap(560),AFSB01056236.1:1..475,gap(540),AFSB01056237.1:1..753, gap(816),AFSB01056238.1:1..386,gap(391),AFSB01056239.1:1..14665, gap(2081),AFSB01056240.1:1..18146,gap(15),AFSB01056241.1:1..6019, gap(438),AFSB01056242.1:1..13003,gap(553),AFSB01056243.1:1..29358, gap(14),AFSB01056244.1:1..6754,gap(54),AFSB01056245.1:1..9155, gap(18),AFSB01056246.1:1..9459,gap(683),AFSB01056247.1:1..707, gap(367),AFSB01056248.1:1..11334,gap(556),AFSB01056249.1:1..19190, gap(51),AFSB01056250.1:1..2025,gap(657),AFSB01056251.1:1..8834, gap(131),AFSB01056252.1:1..5187,gap(220),AFSB01056253.1:1..12160, gap(644),AFSB01056254.1:1..11229,gap(1376),AFSB01056255.1:1..8975, gap(11),AFSB01056256.1:1..6011,gap(131),AFSB01056257.1:1..31797, gap(532),AFSB01056258.1:1..5092,gap(139),AFSB01056259.1:1..2086, gap(17),AFSB01056260.1:1..14953,gap(65),AFSB01056261.1:1..12451, gap(507),AFSB01056262.1:1..8583,gap(292),AFSB01056263.1:1..43480, gap(10),AFSB01056264.1:1..53088,gap(31),AFSB01056265.1:1..8822, gap(18),AFSB01056266.1:1..25997,gap(2235),AFSB01056267.1:1..7672, gap(12),AFSB01056268.1:1..23555,gap(2969),AFSB01056269.1:1..921, gap(11),AFSB01056270.1:1..19191,gap(444),AFSB01056271.1:1..3596, gap(26),AFSB01056272.1:1..4344,gap(52),AFSB01056273.1:1..15695, gap(13),AFSB01056274.1:1..1648,gap(10),AFSB01056275.1:1..9757, gap(15),AFSB01056276.1:1..9908,gap(132),AFSB01056277.1:1..36762, gap(190),AFSB01056278.1:1..16834,gap(154),AFSB01056279.1:1..6618, gap(1392),AFSB01056280.1:1..6010,gap(143),AFSB01056281.1:1..5210) //