LOCUS JH000007 6017914 bp DNA linear CON 25-JUL-2016 DEFINITION Cricetulus griseus cell line CHO-K1 unplaced genomic scaffold scaffold269, whole genome shotgun sequence. ACCESSION JH000007 AFTD01000000 VERSION JH000007.1 DBLINK BioProject: PRJNA69991 BioSample: SAMN02981352 KEYWORDS WGS. SOURCE Cricetulus griseus (Chinese hamster) ORGANISM Cricetulus griseus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus. REFERENCE 1 (bases 1 to 6017914) AUTHORS Xu,X., Nagarajan,H., Lewis,N.E., Pan,S., Cai,Z., Liu,X., Chen,W., Xie,M., Wang,W., Hammond,S., Andersen,M.R., Neff,N., Passarelli,B., Koh,W., Fan,C.H., Wang,J., Gui,Y., Lee,K.H., Betenbaugh,M.J., Quake,S.R., Famili,I., Palsson,B.O. and Wang,J. TITLE The genomic sequence of the Chinese hamster ovary CHO-K1 cell line JOURNAL Unpublished REFERENCE 2 (bases 1 to 6017914) AUTHORS Xu,X., Nagarajan,H., Lewis,N.E., Pan,S., Cai,Z., Liu,X., Chen,W., Xie,M., Wang,W., Hammond,S., Andersen,M.R., Neff,N., Passarelli,B., Koh,W., Fan,C.H., Wang,J., Gui,Y., Lee,K.H., Betenbaugh,M.J., Quake,S.R., Famili,I., Palsson,B.O. and Wang,J. TITLE Direct Submission JOURNAL Submitted (02-AUG-2011) Beijing Genomics Institute in Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen, China COMMENT Source of DNA is available from ATCC Catalog No. CCL-61. ##Genome-Assembly-Data-START## Assembly Method :: SOAPdenovo v. 1.05 Assembly Name :: CriGri_1.0 Genome Coverage :: 130x Sequencing Technology :: Illumina GA IIx ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..6017914 /organism="Cricetulus griseus" /mol_type="genomic DNA" /submitter_seqid="scaffold269" /db_xref="taxon:10029" /chromosome="Unknown" /cell_line="CHO-K1" assembly_gap 4350..5043 /estimated_length=694 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 17665..17879 /estimated_length=215 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 18336..18433 /estimated_length=98 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 20000..20028 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 55384..56497 /estimated_length=1114 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 56684..56892 /estimated_length=209 /gap_type="within scaffold" /linkage_evidence="unspecified" gene 81434..112839 /locus_tag="I79_000381" mRNA join(81434..81545,81643..81784,82742..82861,86201..86300, 86514..86604,90930..91012,91713..91799,92288..92377, 94108..94140,94225..94313,95769..95850,97508..97627, 99256..99405,105643..105692,107875..107982,108103..108211, 108893..109036,111057..111164,112648..112839) /locus_tag="I79_000381" /product="Solute carrier family 15 member 1" CDS join(81434..81545,81643..81784,82742..82861,86201..86300, 86514..86604,90930..91012,91713..91799,92288..92377, 94108..94140,94225..94313,95769..95850,97508..97627, 99256..99405,105643..105692,107875..107982,108103..108211, 108893..109036,111057..111164,112648..112839) /locus_tag="I79_000381" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0005215 - transporter activity [Evidence IEA]; GO_process: GO:0006857 - oligopeptide transport [Evidence IEA]" /codon_start=1 /product="Solute carrier family 15 member 1" /protein_id="EGV94423.1" /db_xref="InterPro:IPR000109" /db_xref="InterPro:IPR016196" /db_xref="UniProtKB/Swiss-Prot:P51574" /db_xref="UniProtKB/TrEMBL:Q14BA3" /translation="MSGYYFPFRQSCFGYPLSIFFIVVNEFCERFSYYGMRALLVLYF RNFIGWDDDLSTAIYHTFAALCYLTPILGALIADSWLGKFKTIISLSIVYTIGQAVIA VSSINDLTDHDHNGTPDSLPVHVALSMIGLVLIAFGTGGIKPCVSAFGGDQFEEGQEK QRNQFFSIFYLAINAGSLLSTIITPILRVVFVLGSGMYKKFQPQGNVMSKVAKCIGFA IKNRFRHRSKAFPKREHWLDWAKEKYDERLISQIKMVMKVMFLYIPLPMFWALFDQQG AIEIQPDQMQTVNAILIVIMVPIMDAVVYPLIAKCGLNFTSLKKMTVGMFLASMAFVA AAIVQVEIDKTLPVFPGGNEVQIKALNIGDNNMTVYFPGSSVTLDQMSQTNNFMTFDA DKLTSINISSPGSPSVTTVVYNFETGHRYTLLVWGPSNFFVVKDGLNQKPEKGENGIR FVNTLNEMLSITMSGKVFENIPTNNASSYQFFPSGVKDFTINGTEIGPNCPRDFKSSN LDFGSAYTYVIRRMSNGCLEVKEFEDIPPNTVNMALQIPQYFLLTCGEVVFSVTGLEF SYSQAPSNMKSVLQAGWLLTVAVGNIIVLIVAGAGHFEKQWAEYILFASLLLVVCVIF AIMARFYTYVNPAEVEAQFDEDEKKKNLEKDNPYATLEPVKQTNM" assembly_gap 85021..85412 /estimated_length=392 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 119074..119223 /estimated_length=150 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 120178..120187 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 153476..153783 /estimated_length=308 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 156597..157930 /estimated_length=1334 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 159995..163496 /estimated_length=3502 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 172977..173181 /estimated_length=205 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 189482..190436 /estimated_length=955 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 203820..203954 /estimated_length=135 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 212923..213291 /estimated_length=369 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 259375..259384 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 276886..277092 /estimated_length=207 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(286253..480679) /locus_tag="I79_000382" mRNA complement(join(286253..286337,287332..287483, 288344..288451,292712..292878,293236..293348, 293432..293514,294046..294135,294290..294358, 297541..297671,300634..300871,303650..303731, 318982..319115,320061..320150,321225..321412, 333724..333979,334895..334970,337157..337225, 338387..338550,339827..339922,342846..342993, 343704..343818,346675..346772,354503..354581, 356103..356145,374963..375067,480509..480679)) /locus_tag="I79_000382" /product="FERM, RhoGEF and pleckstrin domain-containing protein 1" CDS complement(join(286253..286337,287332..287483, 288344..288451,292712..292878,293236..293348, 293432..293514,294046..294135,294290..294358, 297541..297671,300634..300871,303650..303731, 318982..319115,320061..320150,321225..321412, 333724..333979,334895..334970,337157..337225, 338387..338550,339827..339922,342846..342993, 343704..343818,346675..346772,354503..354581, 356103..356145,374963..375067,480509..480679)) /locus_tag="I79_000382" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_component: GO:0005856 - cytoskeleton [Evidence IEA]; GO_function: GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA]; GO_process: GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA]" /codon_start=1 /product="FERM, RhoGEF and pleckstrin domain-containing protein 1" /protein_id="EGV94424.1" /db_xref="InterPro:IPR000219" /db_xref="InterPro:IPR000299" /db_xref="InterPro:IPR001849" /db_xref="InterPro:IPR014847" /db_xref="InterPro:IPR018979" /db_xref="InterPro:IPR018980" /db_xref="InterPro:IPR019748" /db_xref="InterPro:IPR019749" /db_xref="UniProtKB/Swiss-Prot:Q9Y4F1" /db_xref="UniProtKB/TrEMBL:C4IXU2" /translation="MGEIEQKPTPASRLGAPENSGISTLERGQKPPPTPSGKLMTVKI QMLDDTQETFEVPQRAPGKVLLDAVCNHLNLVEGDYFGLEFPDHKKIMVWLDLLKPIA KQIRRPKHVVVKFVVKFFPPDHTQLQEELTRYLFALQVKQDLAQGRLTCNDTSAALLI SHIVQSEIGDFDEASDREHLAKNKYVPQQDALEDKIVEFHHSHIGQTPAESDFQLLEV ARRLEMYGIRLHPAKDREGTKINLAVANTGILVFQGFTKINAFNWAKVRKLSFKRKRF LIKLRPDVNSSYQDTLEFLMAGRDFCKAFWKICVEHHAFFRLFEEPKPKPKPVLFSRG SSFRFSGRTQKQVLDYVKEGGHKKVQFERKHSKINSTRSLASQPTASNSEVPKQSPQS ASLTLGEGSESPGGQSCQQAKEAKVSALESGPHQSPALSKSPPGSKAADGTAMVPPEE EEEEEGGKEGTQPSNRQPPQPSTGSLTGSPHLSELSMNLQGGVATTNVTLSPNLSPDT KQASPLVSPLLNDQACPRTDDEEEGRRKRFPTDKAYFIAKEVSTTERTYLKDLEVIAS WLQSTVSKDDSMPEALKSLIFPNFEPLHKFHTNFLKEIEQRLALWEGRSNAHIRGDYQ RIGDVLLKNIQGMKHLATHLWKHSEALEALENSIKGSRRLEHFCRDFELQKVCYLPLN TFLLRPLHRLMHYKQVLERLCKHHPPSHADFRDCRAALAEITEMVAQLHGTMIKMENF QKLHELKKDLIGVDNLVIPGREFIRLGSLSKLSGKGLQQRMFFLFNDVLLYTSRGLTA SNQFKVHGQLPLYGMTMEESEEEWGVPHCLTLRGQRQSIIVAASSRSEMEKWMEDIQM AIDLAEKSSGPTSELLASSPPDNKSPDETTAADQESEDDLSASRTSLERQAPHRGNTM VHVCWHRNTSVSMVDFSIAVENQLSGNLLRKFKNSNGWQKLWVVFTNFCLFFYKSHQD NHPLASLPLLGYSLTVPSESENIHKDYVFKLHFKSHVYYFRAESEYTFERWMEVIRSA TTCSASRAHILSHKESHLY" assembly_gap 306893..306974 /estimated_length=82 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 331197..331284 /estimated_length=88 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 341289..341339 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 346919..347121 /estimated_length=203 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 367364..367438 /estimated_length=75 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 370975..371636 /estimated_length=662 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 377885..377923 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 386355..386364 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 462918..463231 /estimated_length=314 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 495721..495771 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 509267..509276 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 518182..518211 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 520310..520737 /estimated_length=428 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 542234..543154 /estimated_length=921 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 574011..574136 /estimated_length=126 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 574728..574835 /estimated_length=108 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 575057..579534 /estimated_length=4478 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 600015..600233 /estimated_length=219 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 603327..603555 /estimated_length=229 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 606606..606631 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 611212..611228 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(624826..660766) /locus_tag="I79_000383" mRNA complement(join(624826..624912,625414..625555, 626969..627197,627821..627920,629220..629342, 630221..630276,630363..630474,632331..632456, 632808..632929,633023..633155,635370..635453, 636868..637086,638457..638630,638704..638793, 638883..639007,640928..641034,642344..642431, 643406..643526,648663..648767,660704..660766)) /locus_tag="I79_000383" /product="Importin-5" CDS complement(join(624826..624912,625414..625555, 626969..627197,627821..627920,629220..629342, 630221..630276,630363..630474,632331..632456, 632808..632929,633023..633155,635370..635453, 636868..637086,638457..638630,638704..638793, 638883..639007,640928..641034,642344..642431, 643406..643526,648663..648767,660704..660766)) /locus_tag="I79_000383" /note="GO_function: GO:0005488 - binding [Evidence IEA]" /codon_start=1 /product="Importin-5" /protein_id="EGV94425.1" /db_xref="InterPro:IPR000357" /db_xref="InterPro:IPR016024" /db_xref="UniProtKB/Swiss-Prot:O00410" /db_xref="UniProtKB/TrEMBL:B4E0R6" /translation="MAVRGRRGVAAEHPSWGQPRGIRTLSARATAAFILANEHNVALF KHFADLLPGFLQLCGDTTLNNMQRQLALEVIVTLSETAAAMLRKHTNIVAQTIPQMLA MMVDLEEDEDWANADELEDDDFDSNAVAGESALDRMACGLGGKLVLPMIKEHIMQMLQ NPDWKYRHAGLMALSAIGEGCHQQMEGILNEIVNFVLLFLQDPHPRVRYAACNAVGQM ATDFAPGFQKKFHEKVIAALLQTMEDQGNQRVQAHAAAALINFTEDCPKSLLIPYLDN LVKHLHSIMVLKLAGLIQKGTKLVLEQVVTSIASVADTAEEKFVPYYDLFMPSLKHIV ENAVQKELRLLRGKTIECISLIGLAVGKEKFMQDASDVMQLLLKTQTDFNDMEDDDPQ ISYMISAWARMCKILGKEFQQYLPVVMGPLMKTASIKPEVALLDTQDMENMSDDDGWE FVNLGDQQSFGIKTAGLEEKSTACQMLVCYAKELKEGFVEYTEQVVKLMVPLLKFYFH DDILQGLGRKQCIEVMGDGCLSSEHFEELGGILKAKLEEHFKNQELRQVKRQDEDYDE QVEESLQDEDDNDVYILTKVSDILHSIFSSYKEKVLPWFEQLLPLIVNLIYVCDNSPE VRQAAAYGLGVMAQYGGDNYRPFCTEALPLLVRVIQSADSKTKENVNATENCISAVGK IMKFKPDCVNVEEVLPHWLSWLPLHEDKEEAVQTFSYLCDLIESNNPIVLGPNNTNLP KIFGIIAEGEMHEAIKHEDPCAKRLANVVRQVQTSGGLWTECIAQLSPEQQAAIQELL NSA" assembly_gap 627541..627746 /estimated_length=206 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 659433..660611 /estimated_length=1179 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 684242..684436 /estimated_length=195 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 684616..685053 /estimated_length=438 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 694486..694735 /estimated_length=250 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 697395..697551 /estimated_length=157 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 712254..712300 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 712730..713259 /estimated_length=530 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 713341..713477 /estimated_length=137 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 714817..714957 /estimated_length=141 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 715244..715276 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 716054..716431 /estimated_length=378 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 716483..716679 /estimated_length=197 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 717253..717706 /estimated_length=454 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 726645..727542 /estimated_length=898 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 728335..728876 /estimated_length=542 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 741940..742313 /estimated_length=374 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 758737..758813 /estimated_length=77 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 768433..768474 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 769872..770028 /estimated_length=157 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 775614..776959 /estimated_length=1346 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 803022..803211 /estimated_length=190 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 803526..803573 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 805335..805383 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <805507..806346 /locus_tag="I79_000384" mRNA <805507..806346 /locus_tag="I79_000384" /product="LWamide neuropeptides" CDS <805507..806346 /locus_tag="I79_000384" /codon_start=1 /product="LWamide neuropeptides" /protein_id="EGV94426.1" /db_xref="UniProtKB/Swiss-Prot:Q25060" /db_xref="UniProtKB/TrEMBL:A7SCB9" /translation="SSDPLPPGLNSSDPLPPGLNSSDPLPPGLNSSDPLPPGLNSSDP LPPGLNSSDPLPPGLNSSDPLPPGLNSSDPLPPGLNSSDPLPPGLNSSDPLPPGLNSS DPLPPGLNSSDPLPPGLNSSDPLPPGLNSSDPLPPGLNSSDPLPPGLNSSDPLPPGLN SSDPLPPGLNSSDPLPPGLNSSDPLPPGLNSSDPLPPGLNSSDPLPPGLNSSDPLPPG LNSSDPLPPGLNSSDPLPPGLNSSDPLPPGLNSSDPLPPGLNSSDPLPPGLTPPVTPF LQA" assembly_gap 806448..806473 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 825400..825411 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 880258..880316 /estimated_length=59 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 903220..903742 /estimated_length=523 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 949026..950019 /estimated_length=994 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 966147..966572 /estimated_length=426 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(987511..987834) /locus_tag="I79_000385" mRNA complement(987511..987834) /locus_tag="I79_000385" /product="hypothetical protein" CDS complement(987511..987834) /locus_tag="I79_000385" /codon_start=1 /product="hypothetical protein" /protein_id="EGV94427.1" /translation="MATDAFPLLAFHETSQHAPGSLLGLSFSTERCSNAPTLCFVELG FDPVTTLQLPSLCAKTTGTCFSVPPKGACCVLSSVSVADECEAALSAALGFSFSVFHQ QPHPP" assembly_gap 1004644..1007369 /estimated_length=2726 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1017214..1019361 /estimated_length=2148 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1031369..1031455 /estimated_length=87 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1041441..1041555 /estimated_length=115 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(1049865..1050041) /locus_tag="I79_000386" mRNA complement(1049865..1050041) /locus_tag="I79_000386" /product="Heterogeneous nuclear ribonucleoprotein A3-like 1" CDS complement(1049865..1050041) /locus_tag="I79_000386" /note="GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]" /codon_start=1 /product="Heterogeneous nuclear ribonucleoprotein A3-like 1" /protein_id="EGV94428.1" /db_xref="InterPro:IPR000504" /db_xref="UniProtKB/Swiss-Prot:P51968" /db_xref="UniProtKB/TrEMBL:B4E3E6" /translation="MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVV MTDPKQNVPGALVL" assembly_gap 1072947..1072972 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1073163..1073500 /estimated_length=338 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(1094815..1167215) /locus_tag="I79_000387" mRNA complement(join(1094815..1094864,1102577..1102832, 1106540..1106740,1114920..1115084,1167042..1167215)) /locus_tag="I79_000387" /product="Muscleblind-like protein 2" CDS complement(join(1094815..1094864,1102577..1102832, 1106540..1106740,1114920..1115084,1167042..1167215)) /locus_tag="I79_000387" /note="GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="Muscleblind-like protein 2" /protein_id="EGV94429.1" /db_xref="InterPro:IPR000571" /db_xref="UniProtKB/Swiss-Prot:Q8C181" /db_xref="UniProtKB/TrEMBL:A5PKK4" /translation="MALNVAPVRDTKWLTLEVCRQYQRGTCSRSDEECKFAHPPKSCQ VENGRVIACFDSLKGRCSRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQ FMFPGTPLHPVPTFPVGPTIGTNTAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSP PVTVPGSTATQKLLRTDKLEVCREFQRGNCARGETDCRFAHPADSTMIDTNDNTVTVC MDYIKGRCMREKCKYFHPPAHLQAKIKAAQHQANQAAVAAQAAGHSHGFPSWCSSPIT KETST" assembly_gap 1113051..1113060 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1134635..1134674 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1166699..1166775 /estimated_length=77 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1257716..1257772 /estimated_length=57 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1282107..1282376 /estimated_length=270 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1289564..1289624 /estimated_length=61 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1290142..1290512 /estimated_length=371 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1290909..1291016 /estimated_length=108 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1292487..1292696 /estimated_length=210 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1302682..1302735 /estimated_length=54 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1383723..1383742 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1389820..1390016 /estimated_length=197 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1401971..1403554 /estimated_length=1584 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1403728..1404727 /estimated_length=1000 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1405142..1405504 /estimated_length=363 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1406181..1406408 /estimated_length=228 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1406887..1412091 /estimated_length=5205 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(1419148..1419281) /locus_tag="I79_000388" ncRNA complement(1419148..1419281) /ncRNA_class="snRNA" /locus_tag="I79_000388" /product="U1 spliceosomal RNA" assembly_gap 1425613..1425693 /estimated_length=81 /gap_type="within scaffold" /linkage_evidence="unspecified" gene 1456315..1457421 /locus_tag="I79_000389" mRNA 1456315..1457421 /locus_tag="I79_000389" /product="2-oxoglutarate receptor 1" CDS 1456315..1457421 /locus_tag="I79_000389" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_process: GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]" /codon_start=1 /product="2-oxoglutarate receptor 1" /protein_id="EGV94430.1" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/Swiss-Prot:Q6IYF8" /db_xref="UniProtKB/TrEMBL:B2R986" /translation="MFSALLHPPGYSRWIPMAKLYSPIFLQDETMNEPLDSPVNDSDF LDYAAALGNCTDEQQISFKMQYLPAIYSIIFLVGFPGNTVAISIYIFKMRPWKSSTVI MLNLALTDLLYLTSLPFLIHYYASGENWIFGEFMCKFIRFGFHFNLYSSILFLTCFSV FRYVVIIHPMSCFSLQKTRWAVVACAGVWVISLLAVMPMTFLITSSPRTNRSACLDLT SSDDLTTIKWYNLVLTATTFCLPLVIVTLCYTTIISTLTHGPQTHSCFKQKARRLTIL LLLVFYICFLPFHILRVIRIESRLLSISCNVESHIHEAYIVSRPLAALNTFGNLLLYV VVSNNFQQAFCSLVSCKASRELERAKKDSCFNNP" assembly_gap 1459759..1459883 /estimated_length=125 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1460004..1460088 /estimated_length=85 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1472542..1472590 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1539142..1539162 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1542768..1543244 /estimated_length=477 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1543358..1543461 /estimated_length=104 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(1586999..1587688) /locus_tag="I79_000390" mRNA complement(1586999..1587688) /locus_tag="I79_000390" /product="Heparan-sulfate 6-O-sulfotransferase 3" CDS complement(1586999..1587688) /locus_tag="I79_000390" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0008146 - sulfotransferase activity [Evidence IEA]" /codon_start=1 /product="Heparan-sulfate 6-O-sulfotransferase 3" /protein_id="EGV94431.1" /db_xref="InterPro:IPR018010" /db_xref="UniProtKB/Swiss-Prot:Q9QYK4" /db_xref="UniProtKB/TrEMBL:Q149R8" /translation="MLRDPVSRYLSEWKHVQRGATWKTSLHMCDGRSPTPDELPTCYP GDDWSGVSLREFMDCSYNLANNRQVRMLADLSLVGCYNLTFMNESERSAILLQSAKNN LKNMAFFGLTEFQRKTQFLFERTFNLKFISPFTQFNITRASNVDINEGARQHIEELNF LDVQLYEYAKDLFQQRYHHTKQLEHQRDRQRRREERRLQREHRAHRWPKEDGATEGTV TEDYNSQVVRW" assembly_gap 1627900..1627925 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1649497..1649805 /estimated_length=309 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1658276..1658285 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1675072..1675108 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1705332..1705387 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1731154..1731163 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1741849..1742515 /estimated_length=667 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1769824..1770541 /estimated_length=718 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1771344..1772476 /estimated_length=1133 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1772528..1772729 /estimated_length=202 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1773389..1774222 /estimated_length=834 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1774423..1774566 /estimated_length=144 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1777964..1778051 /estimated_length=88 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1828568..1828728 /estimated_length=161 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1834709..1842946 /estimated_length=8238 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1847257..1847266 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1932098..1932293 /estimated_length=196 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2003134..2005364 /estimated_length=2231 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2202352..2202421 /estimated_length=70 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2211495..2211897 /estimated_length=403 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2218152..2218203 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2218863..2218959 /estimated_length=97 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2232313..2232328 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2234327..2234369 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2261462..2261471 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2263538..2263626 /estimated_length=89 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2306591..2307882 /estimated_length=1292 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2341699..2342322 /estimated_length=624 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <2348469..2447682 /locus_tag="I79_000391" mRNA join(<2348469..2348597,2349046..2349158,2350071..2350245, 2354596..2354699,2387416..2387551,2389783..2389911, 2392747..2392911,2393412..2393535,2393619..2393717, 2397319..2397410,2401453..2401659,2402676..2402807, 2403527..2403651,2404163..2404255,2406884..2406986, 2410978..2411057,2414707..2414896,2425470..2425628, 2426222..2426307,2431854..2431938,2432635..2432717, 2437531..2437675,2441924..2442106,2444137..2444297, 2445241..2445355,2446779..2446895,2447569..2447682) /locus_tag="I79_000391" /product="UDP-glucose:glycoprotein glucosyltransferase 2" CDS join(<2348469..2348597,2349046..2349158,2350071..2350245, 2354596..2354699,2387416..2387551,2389783..2389911, 2392747..2392911,2393412..2393535,2393619..2393717, 2397319..2397410,2401453..2401659,2402676..2402807, 2403527..2403651,2404163..2404255,2406884..2406986, 2410978..2411057,2414707..2414896,2425470..2425628, 2426222..2426307,2431854..2431938,2432635..2432717, 2437531..2437675,2441924..2442106,2444137..2444297, 2445241..2445355,2446779..2446895,2447569..2447682) /locus_tag="I79_000391" /note="GO_function: GO:0003980 - UDP-glucose:glycoprotein glucosyltransferase activity [Evidence IEA]; GO_process: GO:0006486 - protein amino acid glycosylation [Evidence IEA]" /codon_start=1 /product="UDP-glucose:glycoprotein glucosyltransferase 2" /protein_id="EGV94432.1" /db_xref="InterPro:IPR009448" /db_xref="UniProtKB/Swiss-Prot:Q9NYU1" /db_xref="UniProtKB/TrEMBL:Q2NLC7" /translation="SDYSYYNLILKKAGQFLDNIHINLLKFAFSIRAHSPTIQMFQQV AAAEPPPDRCNAFVVIHRERTCKTNEIKKLLNKAASRPRPYLFEKDHKFPTVNENLPV VILYAEIGTREFAEFHRVLSKKSKNGKIAYVLRHYIKPTNVYFSFNVATTDATTEKET EADEVQGFLFGKLKIGFVFILSVDNEVDGAADAGAALWRAFNYIEESYDVSEAFISMI HMYQKVKGGVLTVDNVKSVLQNKAPHTDILDILGTGSKYDKRRAAGTSFYKMTGLDSL PQALYNGEPIDLTEMSTEELKGAVLEKMLDAFTYLQRDVFMGTLNDEINAIDFLMDKN NVVPRLNSLILHTEPQYLNLISSSVTAEIEDFSTFSFLDSQDKSSVIAQSMHYLTAED DVVSAVTVWIVADFDMPSGRKLLSNALKHMETSVHTRLGIIYNPTLKIYEENTVISRG ILAAFLTHKNSLLRRFLRELAKEETAEAIYSGEKIKTFLNMEMDKNAFEKKYNTVGVN IFRTHQLFCQDVLKLQPGKVGIVSNGKFLGPLHEEFYVEDFHLIEKTTFSNSVEKIKD IVENMEINSKHLSDLVMKIDALVSSLPVRSSQPITLLREDHSVIKINPPENDLFFDVI AIVDPLTREAQKMAQLLVVLGKIVNTRIKLFMNCRSKLSEAPLGSFYRFVLEPELMSG ANSSPSDGPVAKFLDIPESHLLTLNMITPEGWLVETVRSNCDLDNINLKDTGGIATAE YELEHLLLEGHCFDLTTEQPPQGLQFTLGTENNPAVVDTIVMANLGYFQLKANPGAWI LKLREGKSEDIYDIVGHEGTDSETDMGDVIVVLDTFKSKILKIEVKKKSGKIMEDILA DKHEDKGMWESIKRIMMLSVLQHTKTPVKFWFLKNYLSPTFKVSMLLFYSAAKFDTNF CVVIEVIPHMAKEYGFQYELVQYKWPRWLHQQTEKQRIIWGYKILFLDVLFPLAVDKI IFVDADQIVRHDLKELRDFDLGGAPYGYTPFCDSRTDMDGYRFWKTGYWASHLMKRKY HISALYVVDLKKFRRISAGDRLRGRYQALSQDPNSLSNLDQDLPNNMIYQVAIKSLPQ DWLWCETWCDDESKQRAKTIDLSTVEEENKCAARLDPEVVLLVEGGDGSSSTWEGSFQ F" assembly_gap 2362061..2362124 /estimated_length=64 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2412241..2412271 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(2464563..2487248) /locus_tag="I79_000392" mRNA complement(join(2464563..2464720,2465899..2466047, 2467491..2467623,2469563..2469683,2469939..2470044, 2471458..2471577,2472162..2472343,2473866..2474018, 2478002..2478076,2480239..2480363,2487062..2487248)) /locus_tag="I79_000392" /product="DnaJ-like subfamily C member 3" CDS complement(join(2464563..2464720,2465899..2466047, 2467491..2467623,2469563..2469683,2469939..2470044, 2471458..2471577,2472162..2472343,2473866..2474018, 2478002..2478076,2480239..2480363,2487062..2487248)) /locus_tag="I79_000392" /note="GO_function: GO:0031072 - heat shock protein binding [Evidence IEA]" /codon_start=1 /product="DnaJ-like subfamily C member 3" /protein_id="EGV94433.1" /db_xref="InterPro:IPR001440" /db_xref="InterPro:IPR001623" /db_xref="InterPro:IPR013026" /db_xref="InterPro:IPR019734" /db_xref="UniProtKB/Swiss-Prot:Q91YW3" /db_xref="UniProtKB/TrEMBL:Q3UFV9" /translation="MTEPSFYFLGLNFVSWGVNAFCFPLGAECGVNADVEKHLELGKK LLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIELKMDF TAARLQRGHLLLKQGKLDEAEEDFKRVLKSNPSENEEKEAQSQLVKSDEMQRLRSQAL DAFESADYSAAISFLDMILEVCVWDAELRELRADCFMKEGEPRKAISDLKAAAKLKSG NTEAFYRISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEEL IREGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQME PDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNENDQQIREGLEKAQRLLKQSQKRD YYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDP EMRKKFDDGEDPLDAESQQGGGGNPFHRSWNSWQGFNPFSSGGPFRFKFHFN" assembly_gap 2483252..2483285 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2483544..2484169 /estimated_length=626 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2484221..2484256 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2484483..2484803 /estimated_length=321 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2485002..2485547 /estimated_length=546 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2488377..2488751 /estimated_length=375 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2497190..2497201 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2497709..2499393 /estimated_length=1685 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2510228..2510253 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2513189..2514152 /estimated_length=964 /gap_type="within scaffold" /linkage_evidence="unspecified" gene 2514162..2562736 /locus_tag="I79_000393" mRNA join(2514162..2514632,2521195..2521279,2523872..2523996, 2524823..2524984,2526596..2526733,2529365..2529427, 2533626..2533766,2534229..2534277,2544029..2544091, 2547385..2547521,2549175..2549337,2549746..2549875, 2559042..2559235,2561025..2561155,2562440..2562736) /locus_tag="I79_000393" /product="Zinc finger protein DZIP1" CDS join(2514162..2514632,2521195..2521279,2523872..2523996, 2524823..2524984,2526596..2526733,2529365..2529427, 2533626..2533766,2534229..2534277,2544029..2544091, 2547385..2547521,2549175..2549337,2549746..2549875, 2559042..2559235,2561025..2561155,2562440..2562736) /locus_tag="I79_000393" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="Zinc finger protein DZIP1" /protein_id="EGV94434.1" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR015880" /db_xref="UniProtKB/Swiss-Prot:Q8BMD2" /db_xref="UniProtKB/TrEMBL:Q4QQM0" /translation="MASVPPGAASGPLPFFQFRPRLESVDWRRLSAIDVDKVAGAVDV LTLQENIMNITFCKLEDEKCPHCQSGVDPVLLKLIRLAQLTIEYLMHSQEFLTSQLNL VEERLRLSLIDYEQSKQLLSKQAGEIKLLKDECKRRKKMLSTQQLMIEAKASYYQCHF CDKAFMNQAFLQSHIQRRHSAESHLEYNTKAQTDRLQKEIDMLKEQLQLTRSQLESAQ YAHAVRFSKEHEMQKTKEDDFLKLFERWKEEEKEKLLDEMEKVKEMFMKEFKELTSKN SALEYQLLEIQKSNMQIKSNIGTLKDINECKEDHPPCPQDFQNMLQLLDSQASKWSDR FQVLNEEHSKEKGQLLSHIEKLRSSMMEDLSADNVFYKRRVEELGQKVQEQNELILSQ RQQIREFTSKPCNNVGELKEQGFSSHVLEPIEELSSEEEKGRENEQKLNKKTHFRKTL RGNPSSKGLRTNLEKELGKKLRSFGIDADIHGIPCEILNKSLKAMQLARHDLAKQMPN IQQIRESLEHQLICKIEEKVSLTSDRHNDPPMIISAAEEAPKATQLPPQSRPLVRQRA VFTDKVAVPKTPPFSSEEEPEEEDLIQAYVSSDLMTLQPCKNSMSNLRKSSVRSDTDW TEGSEMEDSDVSPKPSGTSIKIQTEDVESMVLHEGSGSNLVTGMNIAETLVKREELHE FKCAEVDNDDWDVSSLEEEKSLEKRMEQREPLPVKRDLSSSQLPRAWGPVNPREFKEE GSQFSLSCMDGLCFCGVHVCVFVWVHIYAHTCGGRSQSWDCS" assembly_gap 2553023..2553350 /estimated_length=328 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2553554..2553748 /estimated_length=195 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2554067..2554360 /estimated_length=294 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2555131..2555647 /estimated_length=517 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2556708..2556783 /estimated_length=76 /gap_type="within scaffold" /linkage_evidence="unspecified" gene 2565393..2565557 /locus_tag="I79_000394" mRNA 2565393..2565557 /locus_tag="I79_000394" /product="hypothetical protein" CDS 2565393..2565557 /locus_tag="I79_000394" /codon_start=1 /product="hypothetical protein" /protein_id="EGV94435.1" /translation="MPPARELCQQPAAFRATAYRILMLLTILHLNKEARSLSLATPNT VLKAVSWSTV" gene complement(2568522..2586840) /locus_tag="I79_000395" mRNA complement(join(2568522..2568645,2569324..2569431, 2580014..2580095,2586621..2586840)) /locus_tag="I79_000395" /product="Claudin-10A" CDS complement(join(2568522..2568645,2569324..2569431, 2580014..2580095,2586621..2586840)) /locus_tag="I79_000395" /note="GO_component: GO:0016020 - membrane [Evidence IEA]" /codon_start=1 /product="Claudin-10A" /protein_id="EGV94436.1" /db_xref="InterPro:IPR004031" /db_xref="UniProtKB/Swiss-Prot:Q9Z0S6" /db_xref="UniProtKB/TrEMBL:Q6IBF9" /translation="MASTALEIIAFTVSISGWVLVSSTLPTDYWKVSTIDGTVITTAT YFANLWKMCVTDSTGVANCKDFPSMLALDGLCSMTGCSLYANKITTEFFDPLFMEQKY ELGAALFIGWAGASLCIIGGVIFCFSISDNNKTPRMGYTYNGPTSVMSSRTKYQGGEG DFKTTSPSKQFDKNAYV" assembly_gap 2600041..2600578 /estimated_length=538 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(2620641..2620714) /locus_tag="I79_000396" ncRNA complement(2620641..2620714) /ncRNA_class="other" /locus_tag="I79_000396" /product="5S ribosomal RNA" /note="rRNA" assembly_gap 2663781..2664088 /estimated_length=308 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2740997..2742023 /estimated_length=1027 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2758287..2758640 /estimated_length=354 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <2778215..2954213 /locus_tag="I79_000397" mRNA join(<2778215..2778324,2778815..2778935,2791056..2791280, 2807702..2807791,2808831..2808994,2810502..2810627, 2812948..2813197,2820003..2820104,2824064..2824153, 2825148..2825339,2828269..2828363,2828575..2828661, 2834273..2834369,2837291..2837500,2839175..2839315, 2839654..2839691,2840390..2840484,2842190..2842336, 2882071..2882150,2897336..2897486,2903006..2903125, 2904200..2904310,2905201..2905301,2909448..2909639, 2917708..2917863,2926887..2926976,2934170..2934342, 2934933..2935038,2943611..2943745,2954106..2954213) /locus_tag="I79_000397" /product="Multidrug resistance-associated protein 4" CDS join(<2778215..2778324,2778815..2778935,2791056..2791280, 2807702..2807791,2808831..2808994,2810502..2810627, 2812948..2813197,2820003..2820104,2824064..2824153, 2825148..2825339,2828269..2828363,2828575..2828661, 2834273..2834369,2837291..2837500,2839175..2839315, 2839654..2839691,2840390..2840484,2842190..2842336, 2882071..2882150,2897336..2897486,2903006..2903125, 2904200..2904310,2905201..2905301,2909448..2909639, 2917708..2917863,2926887..2926976,2934170..2934342, 2934933..2935038,2943611..2943745,2954106..2954213) /locus_tag="I79_000397" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0016887 - ATPase activity [Evidence IEA]; GO_function: GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO_function: GO:0042626 - ATPase activity, coupled to transmembrane movement of substances [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]" /codon_start=1 /product="Multidrug resistance-associated protein 4" /protein_id="EGV94437.1" /db_xref="InterPro:IPR001140" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR011527" /db_xref="InterPro:IPR017940" /db_xref="UniProtKB/Swiss-Prot:O15439" /db_xref="UniProtKB/TrEMBL:B9EKC2" /translation="WLNPLFKTGHTRRLEEDDMYSVLPEDRSKHLGEELQGYWDKELL RAKEDARKPSLTRAIIRCYWKSYVVLGIFTLIEESTRVVQPIFLGKIIEYFEKYDPNN SVALHTAYGYASVLSVCTLVLAILHHLYFYHVQCAGMRLRVAMCHMIYRKALRLSNTA MGKTTTGQIVNLLSNDVNKFDQVTIFLHFLWAGPLQAIGVTILLWVEIGISCLAGMAV LVVLLPLQSCIGKLFSSLRSKTAAFTDARIRTMNEVITGMRIIKMYAWETSFAELITS LRRKEISKILGSSYLRGMNMASFFIANKIILFVTFTTYVLLGNQITASHVFVAMTLYG AVRLTVTLFFPSAIEKVSETVISIRRIKNFLLLDELPQRKAQEPCDGKAIVHVQDFTA FWDKALDTPTLQGLSFTARPGELLAVVGPVGAGKSSLLSAVLGELPPASGLVNVHGRI AYVSQQPWVFSGTVRSNILFGKKYEKERYEKVIKACALKKDLQLLEDGDLTVIGDRGA TLSGGQKARVNLARAVYQDADIYLLDDPLSAVDAEVGKHLFQLCICQTLHEKVTILVT HQLQYLKAASHILILKDGQVVQKGTYTEFLKSGVDFGSLLKTENEEAEHPSASGTPTL RKRTFSESSIWSQQSSRPSLKDGVPEGQDTENPQAVQPEESRSEGKVGFKAYKNYFTA GASWFFILFLILLNMAAQVFYVLQDWWLSHWANKQGALNNTNNANGNVTETLDLHWYL GIYSGLTAITVLFGIARSLLVFYVLVKASQTLHNRMFESILKAPVLFFDRNPIGRILN RFSKDIGHMDDLLPLTFLDFIQTLLLVVSVIAVAAAVIPWIIIPLVPLAIIFLVLRRY FLETSRDVKRLESTTRSPVFSHLSSSLQGLWTIRAYKAEERFQELFDAHQDLHSEAWF LFLTTSRWFAVRLDAICAVFVIVVAFGSLILAKTLDAGQVGLALSYALTLMGMFQWSV RQSAEVENMMISVERVIEYTNLEKEAPWEYQKRPPPGWPQEGVIVFDNMNFTYSLDGP LVLKHLTALIKSREKVGIVGRTGAGKSSLISALFRLSEPEGKIWIDKILTTEIGLHDL RKKMSIIPQEPVLFTGTMRKNLDPFNEHTDEELWNALEEVQLKEAIEDLPGKMDTELA ESGSNFSVGQRQLVCLARAILKKNRILIIDEATANVDPRTDELIQQKIREKFAQCTVL TIAHRLNTIIDSDKIMVLDSGRLKEYDEPYVLLQNPESLFYKMVQQLGKGEAAALTET AKQVYFRRNYPDIAFTSPVVTNTSNGQPSALTIFETAL" assembly_gap 2779413..2779488 /estimated_length=76 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2827941..2827950 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2880079..2880478 /estimated_length=400 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2906004..2907978 /estimated_length=1975 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 2908120..2908508 /estimated_length=389 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(2958298..2958597) /locus_tag="I79_000398" mRNA complement(2958298..2958597) /locus_tag="I79_000398" /product="Transcription elongation factor B polypeptide 2" CDS complement(2958298..2958597) /locus_tag="I79_000398" /codon_start=1 /product="Transcription elongation factor B polypeptide 2" /protein_id="EGV94438.1" /db_xref="UniProtKB/Swiss-Prot:P62870" /db_xref="UniProtKB/TrEMBL:Q6P7Z2" /translation="MDEFLMIWHHKTTILTDAKESSTVFELKHILEGILKRPPMCSGC TRMTSSLMMEKLGECGFTSQTAGPQAQPQWAWPSEQMPLKPCALSPSPVLQSFQM" assembly_gap 2989796..2989875 /estimated_length=80 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3013744..3013904 /estimated_length=161 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3020854..3021131 /estimated_length=278 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3026755..3026776 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3033735..3034225 /estimated_length=491 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3038449..3038462 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3042431..3042463 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3052280..3052289 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3056119..3056225 /estimated_length=107 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3091311..3092009 /estimated_length=699 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3116230..3116286 /estimated_length=57 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3198790..3198848 /estimated_length=59 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3212767..3213760 /estimated_length=994 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3214048..3215156 /estimated_length=1109 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3223031..3223504 /estimated_length=474 /gap_type="within scaffold" /linkage_evidence="unspecified" gene 3299889..3300062 /locus_tag="I79_000399" mRNA 3299889..3300062 /locus_tag="I79_000399" /product="hypothetical protein" CDS 3299889..3300062 /locus_tag="I79_000399" /codon_start=1 /product="hypothetical protein" /protein_id="EGV94439.1" /translation="MIQAGSDIARRLRFKGETGSVFFFPSALAPVAGCDQPARRDANR ASDKVSLIKYIGL" gene complement(3305480..3329144) /locus_tag="I79_000401" mRNA complement(join(3305480..3305638,3306899..3306976, 3308560..3308751,3311648..3311805,3314807..3314856, 3314985..3315165,3321672..3321872,3329027..3329144)) /locus_tag="I79_000401" /product="Integral membrane protein GPR180" CDS complement(join(3305480..3305638,3306899..3306976, 3308560..3308751,3311648..3311805,3314807..3314856, 3314985..3315165,3321672..3321872,3329027..3329144)) /locus_tag="I79_000401" /codon_start=1 /product="Integral membrane protein GPR180" /protein_id="EGV94441.1" /db_xref="InterPro:IPR019336" /db_xref="UniProtKB/Swiss-Prot:Q86V85" /db_xref="UniProtKB/TrEMBL:Q6ZT96" /translation="MAVGKEAKLYLFQAQEWLKLQESSPGYSCSERLSRAQLTMTMNQ TEHNLTVSQIPAPQTWHVFYADKYTCREDVESPQGEDIPFEMVLLNPDAEGNSFDHFS AGESGLHEFFFLLVLVYFVVACVYAQALWQALRKGGPMHMVLKVLTTALLLQAASALA NYIHFSRYSKDGIGVPLMGSLAEVFDIASQIQMLYLLLSLCMGWTIVRMKKSPSRPLQ WDSTPASTGIAVVIVVTQSILLLWEQFEDTRHHSSHSHRSLAGVLLIVLRICLALSLG CGLSQIITMERSTLKRDFYITFAKGCILWFLCQPVLACVAVIFNEYQRDKVITIGVIL CQSVSMVILYRLFLSHSLYWEVSSLSSVTLPLTIPSGHKSRPHF" gene 3307892..3308203 /locus_tag="I79_000400" mRNA 3307892..3308203 /locus_tag="I79_000400" /product="hypothetical protein" CDS 3307892..3308203 /locus_tag="I79_000400" /codon_start=1 /product="hypothetical protein" /protein_id="EGV94440.1" /translation="MLPLAEKEGNAFRNAYIQILQQRNVGAGGTDSTRQWRELRQTSS EALCSEHWSNSKALDWMDTERIQAALRFLRHKDAEQRGHRRMKQPTQYVRRPLGGILS S" assembly_gap 3331586..3331952 /estimated_length=367 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3334806..3335350 /estimated_length=545 /gap_type="within scaffold" /linkage_evidence="unspecified" gene 3337019..3355015 /locus_tag="I79_000402" mRNA join(3337019..3337039,3338881..3338949,3339732..3339822, 3346069..3346211,3348770..3348868,3350172..3350231, 3350932..3350975,3351766..3351931,3353054..3353112, 3353644..3353741,3354930..3355015) /locus_tag="I79_000402" /product="dTDP-D-glucose 4,6-dehydratase" CDS join(3337019..3337039,3338881..3338949,3339732..3339822, 3346069..3346211,3348770..3348868,3350172..3350231, 3350932..3350975,3351766..3351931,3353054..3353112, 3353644..3353741,3354930..3355015) /locus_tag="I79_000402" /note="GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0005488 - binding [Evidence IEA]; GO_function: GO:0050662 - coenzyme binding [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0044237 - cellular metabolic process [Evidence IEA]" /codon_start=1 /product="dTDP-D-glucose 4,6-dehydratase" /protein_id="EGV94442.1" /db_xref="InterPro:IPR001509" /db_xref="InterPro:IPR016040" /db_xref="UniProtKB/Swiss-Prot:Q8VDR7" /db_xref="UniProtKB/TrEMBL:Q3U4A6" /translation="MVINLDKLDYCASLKNLEPVSNKQNYKFIQGDICDSHFVKLLFE MEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNTAYEARVEKFIYVSTDEVY GGSVDQEFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVYGPHQYPE KVIPKFISLLQHDRKCCIHGSGLQRRNFLYAADVVEAFLTVLQKGEPGEIYNIGTSFE MSVVQLAKELIQLIKETSSESETERWVDYVNDRPHNDMRYPMKSEKIHSLGWKPKVPW EEGIKKTVEWYRENFHNWKNAEKALEPFPVQPPFI" assembly_gap 3385340..3385349 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3395999..3396030 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3396262..3396277 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="unspecified" gene 3407567..3447930 /locus_tag="I79_000403" mRNA join(3407567..3407861,3416052..3416351,3419028..3419128, 3419770..3419936,3423073..3423252,3425102..3425237, 3442952..3443153,3447758..3447930) /locus_tag="I79_000403" /product="L-dopachrome tautomerase" CDS join(3407567..3407861,3416052..3416351,3419028..3419128, 3419770..3419936,3423073..3423252,3425102..3425237, 3442952..3443153,3447758..3447930) /locus_tag="I79_000403" /note="GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]" /codon_start=1 /product="L-dopachrome tautomerase" /protein_id="EGV94443.1" /db_xref="InterPro:IPR002227" /db_xref="InterPro:IPR008922" /db_xref="UniProtKB/Swiss-Prot:P29812" /db_xref="UniProtKB/TrEMBL:Q6NXI2" /translation="MGLVHWGLLLGCLGCGILLGVQAQFPRVCMTLEGVLNKECCPPL GPEPANICGSQEGRGQCTEVQTDTRPWSGPYVLRNQDDREQWPRKFFNRTCKCTGNFA GYDCGGCRFGWTGPNCDQKKPRVLRRDIHSLTAQEREQFLTALDLAKKTVHPDYVITT QHWLGLLGPNRTQPQIANCSVYDFFVWLHYYSVRDTLLGPGRPYKAIDFSHQGPAFVT WHRYHLLWLERDLQRLIGNESFALPYWNFATGKTECDVCTDELLGAARQDDPTLISQS SRFSTWEIVCDSLDDYNRRVTLCNGTYEGLLRRNQVGRNSETLPTLKNIQDCLSLQEF DSPPFLQNATFSFRNALEGFDKADGTLDSQVMSLHNLVHSFLNGTNALPHSAANDPVF VVLHSFTDAIFDEWLKRNNPPTDAWPQELAPIGHNRMYNMVPFFPPVTNEELFLTADQ LGYDYAIDLPVEKAPVWTTTLSVVTGTLGAFVGLLGLLAFLQYRRLRKGYAPLMETHL SSKRYTEEA" assembly_gap 3430093..3431241 /estimated_length=1149 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3431419..3431710 /estimated_length=292 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3448285..3448481 /estimated_length=197 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3457327..3457336 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3467088..3467187 /estimated_length=100 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3477660..3477713 /estimated_length=54 /gap_type="within scaffold" /linkage_evidence="unspecified" gene 3485282..3485539 /locus_tag="I79_000404" mRNA 3485282..3485539 /locus_tag="I79_000404" /product="hypothetical protein" CDS 3485282..3485539 /locus_tag="I79_000404" /codon_start=1 /product="hypothetical protein" /protein_id="EGV94444.1" /translation="MDCFPLLVARLCCFKFKYARDCESSKRSLSIGKCLEKSNPASIN MGNLKLLPGNQPCRKRQETDHKSGFYQVLFLLEDFSWCLVW" gene complement(3487504..3487743) /locus_tag="I79_000405" mRNA complement(3487504..3487743) /locus_tag="I79_000405" /product="hypothetical protein" CDS complement(3487504..3487743) /locus_tag="I79_000405" /codon_start=1 /product="hypothetical protein" /protein_id="EGV94445.1" /translation="MICEHQESRKRTLYVSNCPTYKIARAPPFTQVCIVPGALNCPEL VGRALVCEVLLAMECVCVKNVTHENPLLSCTTSVA" gene complement(3489014..3593881) /locus_tag="I79_000406" mRNA complement(join(3489014..3489216,3494807..3494982, 3508158..3508294,3573755..3573898,3593807..3593881)) /locus_tag="I79_000406" /product="Glypican-6" CDS complement(join(3489014..3489216,3494807..3494982, 3508158..3508294,3573755..3573898,3593807..3593881)) /locus_tag="I79_000406" /note="GO_component: GO:0005578 - proteinaceous extracellular matrix [Evidence IEA]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0043395 - heparan sulfate proteoglycan binding [Evidence IEA]" /codon_start=1 /product="Glypican-6" /protein_id="EGV94446.1" /db_xref="InterPro:IPR001863" /db_xref="UniProtKB/Swiss-Prot:Q9Y625" /db_xref="UniProtKB/TrEMBL:A8K279" /translation="MDPIDVKISEAIMNMQENSMQVSAKVFQGCGQPKPAPALRSARS APENFNTRFRPYNPEERPTTAAGTSLDRLVTDIKEKLKLSKKVWSALPYTICKDEGVT AGTSNEEECWNGHSKARYLPEIMNDGLTNQINNPEVEVDITRPDTFIRQQIMALRVMT NKLKNAYNGNDVNFQDTSDESSGSGSGSGCMDDVCPTEFEFVTTEAPAVDPDRREEES SGTQGSYSLLSWSLVCMALALQRLHR" assembly_gap 3509320..3509329 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3509484..3511191 /estimated_length=1708 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3511389..3514856 /estimated_length=3468 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3551971..3552217 /estimated_length=247 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3555888..3555939 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3634418..3634434 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3635618..3635690 /estimated_length=73 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3747649..3747904 /estimated_length=256 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3848573..3848591 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3869353..3869556 /estimated_length=204 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3869767..3869844 /estimated_length=78 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3934482..3934524 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(4008684..4025117) /locus_tag="I79_000407" mRNA complement(join(4008684..4008749,4010731..4011122, 4025096..4025117)) /locus_tag="I79_000407" /product="Glypican-6" CDS complement(join(4008684..4008749,4010731..4011122, 4025096..4025117)) /locus_tag="I79_000407" /note="GO_component: GO:0005578 - proteinaceous extracellular matrix [Evidence IEA]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0043395 - heparan sulfate proteoglycan binding [Evidence IEA]" /codon_start=1 /product="Glypican-6" /protein_id="EGV94447.1" /db_xref="InterPro:IPR001863" /db_xref="UniProtKB/Swiss-Prot:Q9R087" /db_xref="UniProtKB/TrEMBL:Q3V1C9" /translation="MRFYLSGEFFRELLENAEKSLNDMFVRTYGMLYMQNSEVFQDLF TELKRYYTGGNVNLEEMLNDFWARLLERMFQLINPQYHFSEDYLECVSKYTDQLKPFG DVPRKLKIQVTRAFIAARTFVQGLTVGREVANRVSKVSVCRDSNVHQGMMDDIRNQP" assembly_gap 4131832..4134862 /estimated_length=3031 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4188368..4188535 /estimated_length=168 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4236589..4236740 /estimated_length=152 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4237927..4237993 /estimated_length=67 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4348625..4348641 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4348773..4348782 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4423930..4424036 /estimated_length=107 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4466134..4466143 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4473778..4474051 /estimated_length=274 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4493744..4497081 /estimated_length=3338 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4512712..4512754 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4581068..4581181 /estimated_length=114 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4587009..4587066 /estimated_length=58 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4602281..4602438 /estimated_length=158 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4682018..4682030 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4685215..4687268 /estimated_length=2054 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4687465..4689534 /estimated_length=2070 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4689749..4690636 /estimated_length=888 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4708966..4709042 /estimated_length=77 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4723654..4723942 /estimated_length=289 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4759576..4759846 /estimated_length=271 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4760076..4760312 /estimated_length=237 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4760482..4761132 /estimated_length=651 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4761381..4761576 /estimated_length=196 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4761981..4762066 /estimated_length=86 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4762568..4763219 /estimated_length=652 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4763873..4764858 /estimated_length=986 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4800472..4800637 /estimated_length=166 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4802661..4802866 /estimated_length=206 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4803173..4803501 /estimated_length=329 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4806400..4806494 /estimated_length=95 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4841311..4841361 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4889040..4889049 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4900259..4905706 /estimated_length=5448 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4920716..4924561 /estimated_length=3846 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4936304..4941739 /estimated_length=5436 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4951795..4951950 /estimated_length=156 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 4986101..4986230 /estimated_length=130 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5003784..5003844 /estimated_length=61 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5046380..5046392 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5051428..5052370 /estimated_length=943 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5052516..5052689 /estimated_length=174 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5053098..5053462 /estimated_length=365 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5062010..5062053 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5062777..5063553 /estimated_length=777 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5100152..5100224 /estimated_length=73 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5100325..5100437 /estimated_length=113 /gap_type="within scaffold" /linkage_evidence="unspecified" gene 5224645..5226050 /locus_tag="I79_000408" mRNA join(5224645..5224860,5225451..5226050) /locus_tag="I79_000408" /product="Stress-induced-phosphoprotein 1" CDS join(5224645..5224860,5225451..5226050) /locus_tag="I79_000408" /codon_start=1 /product="Stress-induced-phosphoprotein 1" /protein_id="EGV94448.1" /db_xref="InterPro:IPR001440" /db_xref="InterPro:IPR013026" /db_xref="InterPro:IPR019734" /db_xref="UniProtKB/Swiss-Prot:P31948" /db_xref="UniProtKB/TrEMBL:B4DM70" /translation="MWGGQIRFNRVLCQAMEQANELKEKGNKVLSAGNIDDALQCYSE AIKLDPQNHVLYRNRSAAYEDGCMTVDLKGDYNKCRELREKANEVGRENREDSRQIAK AYARIGNSYFKEERYKDDNHFYNKSLVEHRTPDVLKKCQLADKILKEQERLAYINPNL ALEESKGNECFQKGDYPQAMKHYTEAIKWNPKDAKLYNNRAACYNMLLEFQLALKDCE ECIELEPTFIKCYTWKAAALEAMKDYTKAMDVYQKALDPDSSCKEAADGSSIV" gene complement(5293754..5293857) /locus_tag="I79_000409" ncRNA complement(5293754..5293857) /ncRNA_class="snRNA" /locus_tag="I79_000409" /product="U6 spliceosomal RNA" assembly_gap 5301002..5301014 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5385776..5385795 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5436180..5436214 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5552272..5552559 /estimated_length=288 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5557707..5557718 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5566122..5566305 /estimated_length=184 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(5569163..5569280) /locus_tag="I79_000410" ncRNA complement(5569163..5569280) /ncRNA_class="other" /locus_tag="I79_000410" /product="5S ribosomal RNA" /note="rRNA" gene 5575527..5575730 /locus_tag="I79_000411" mRNA 5575527..5575730 /locus_tag="I79_000411" /product="hypothetical protein" CDS 5575527..5575730 /locus_tag="I79_000411" /codon_start=1 /product="hypothetical protein" /protein_id="EGV94449.1" /translation="MNLIQLIVVNPWKMNGNAASLAMSRLHFFFVAHQRNAILTSPVN SMPHQKHFIITTLRKLVAKNKGV" gene complement(5588570..5588839) /locus_tag="I79_000413" mRNA complement(5588570..5588839) /locus_tag="I79_000413" /product="hypothetical protein" CDS complement(5588570..5588839) /locus_tag="I79_000413" /codon_start=1 /product="hypothetical protein" /protein_id="EGV94451.1" /translation="MPIATTQNKDVDQAKLLPEDMSQSMEQLQLWCALNSVAQVTTRA HTETLGSVLEPVACLDSGEPHNSRSHTDMGGLYYHLGPECHPGCL" gene 5588832..5589146 /locus_tag="I79_000412" mRNA 5588832..5589146 /locus_tag="I79_000412" /product="hypothetical protein" CDS 5588832..5589146 /locus_tag="I79_000412" /codon_start=1 /product="hypothetical protein" /protein_id="EGV94450.1" /translation="MGIETRMALKAAWSLYTKATGCGPDSRLHVARWCHGNTGINNDI SCSRTTTGIDMAFCCSSQGLDGTMAPVDSKSLQDRYGPSGSMAHEPELGPRRQFWSLE SA" assembly_gap 5590296..5590325 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="unspecified" gene 5591444..5591599 /locus_tag="I79_000414" mRNA 5591444..5591599 /locus_tag="I79_000414" /product="hypothetical protein" CDS 5591444..5591599 /locus_tag="I79_000414" /codon_start=1 /product="hypothetical protein" /protein_id="EGV94452.1" /translation="MCVPGAPWKPEECIRWIRSPRTQVTDGCELPCRCSELNPGPLED QTVFFVT" gene 5591632..5591886 /locus_tag="I79_000415" mRNA 5591632..5591886 /locus_tag="I79_000415" /product="hypothetical protein" CDS 5591632..5591886 /locus_tag="I79_000415" /codon_start=1 /product="hypothetical protein" /protein_id="EGV94453.1" /translation="MERAITNLCLKQFLEEQTCKCSPIHREGYEWSGNRHSRLLSIML EIIDSYYLGILVKKRTVAERLPNVTCEEWNEVGNKIFSPV" gene 5595711..5595914 /locus_tag="I79_000416" mRNA 5595711..5595914 /locus_tag="I79_000416" /product="hypothetical protein" CDS 5595711..5595914 /locus_tag="I79_000416" /codon_start=1 /product="hypothetical protein" /protein_id="EGV94454.1" /translation="MDSLSGCLFHGRVCQTFHIRTQRETTDKFCKYKAKQIFIFPASL RSLPDTLGLQAEDGCPNIAEEQL" assembly_gap 5606471..5606553 /estimated_length=83 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5607544..5607580 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5607812..5607969 /estimated_length=158 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5661650..5661697 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5736058..5736153 /estimated_length=96 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5746814..5746825 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5759396..5759975 /estimated_length=580 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5851696..5851739 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5894126..5894422 /estimated_length=297 /gap_type="within scaffold" /linkage_evidence="unspecified" gene 5908444..5908725 /locus_tag="I79_000417" mRNA 5908444..5908725 /locus_tag="I79_000417" /product="Ras GTPase-activating protein-binding protein 1" CDS 5908444..5908725 /locus_tag="I79_000417" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]" /codon_start=1 /product="Ras GTPase-activating protein-binding protein 1" /protein_id="EGV94455.1" /db_xref="InterPro:IPR002075" /db_xref="InterPro:IPR018222" /db_xref="UniProtKB/Swiss-Prot:P97855" /db_xref="UniProtKB/TrEMBL:Q571F9" /translation="MVMEKPSPLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYAHWG LDSNGKPADAVYGQKEIHRKVMSQNFTNFHTKIRHVDARATLNDGWGSK" gene 5909637..5909840 /locus_tag="I79_000418" mRNA 5909637..5909840 /locus_tag="I79_000418" /product="Ras GTPase-activating protein-binding protein 1" CDS 5909637..5909840 /locus_tag="I79_000418" /codon_start=1 /product="Ras GTPase-activating protein-binding protein 1" /protein_id="EGV94456.1" /db_xref="UniProtKB/Swiss-Prot:P97855" /db_xref="UniProtKB/TrEMBL:Q571F9" /translation="MFRGAVRLNVEEKKTRAAREGDRRDNGLRGPGGPRGGPSGGMRG PPCGGLVQKPGFGVGRGIATPRQ" gene complement(5912757..5912827) /locus_tag="I79_000419" ncRNA complement(5912757..5912827) /ncRNA_class="other" /locus_tag="I79_000419" /product="tRNA-Gly" /note="tRNA" assembly_gap 5919305..5919504 /estimated_length=200 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5919609..5919698 /estimated_length=90 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5920440..5920473 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5962519..5962559 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 5992364..5994090 /estimated_length=1727 /gap_type="within scaffold" /linkage_evidence="unspecified" CONTIG join(AFTD01023070.1:1..4349,gap(694),AFTD01023071.1:1..12621, gap(215),AFTD01023072.1:1..456,gap(98),AFTD01023073.1:1..1566, gap(29),AFTD01023074.1:1..35355,gap(1114),AFTD01023075.1:1..186, gap(209),AFTD01023076.1:1..28128,gap(392),AFTD01023077.1:1..33661, gap(150),AFTD01023078.1:1..954,gap(10),AFTD01023079.1:1..33288, gap(308),AFTD01023080.1:1..2813,gap(1334),AFTD01023081.1:1..2064, gap(3502),AFTD01023082.1:1..9480,gap(205),AFTD01023083.1:1..16300, gap(955),AFTD01023084.1:1..13383,gap(135),AFTD01023085.1:1..8968, gap(369),AFTD01023086.1:1..46083,gap(10),AFTD01023087.1:1..17501, gap(207),AFTD01023088.1:1..29800,gap(82),AFTD01023089.1:1..24222, gap(88),AFTD01023090.1:1..10004,gap(51),AFTD01023091.1:1..5579, gap(203),AFTD01023092.1:1..20242,gap(75),AFTD01023093.1:1..3536, gap(662),AFTD01023094.1:1..6248,gap(39),AFTD01023095.1:1..8431, gap(10),AFTD01023096.1:1..76553,gap(314),AFTD01023097.1:1..32489, gap(51),AFTD01023098.1:1..13495,gap(10),AFTD01023099.1:1..8905, gap(30),AFTD01023100.1:1..2098,gap(428),AFTD01023101.1:1..21496, gap(921),AFTD01023102.1:1..30856,gap(126),AFTD01023103.1:1..591, gap(108),AFTD01023104.1:1..221,gap(4478),AFTD01023105.1:1..20480, gap(219),AFTD01023106.1:1..3093,gap(229),AFTD01023107.1:1..3050, gap(26),AFTD01023108.1:1..4580,gap(17),AFTD01023109.1:1..16312, gap(206),AFTD01023110.1:1..31686,gap(1179),AFTD01023111.1:1..23630, gap(195),AFTD01023112.1:1..179,gap(438),AFTD01023113.1:1..9432, gap(250),AFTD01023114.1:1..2659,gap(157),AFTD01023115.1:1..14702, gap(47),AFTD01023116.1:1..429,gap(530),AFTD01023117.1:1..81, gap(137),AFTD01023118.1:1..1339,gap(141),AFTD01023119.1:1..286, gap(33),AFTD01023120.1:1..777,gap(378),AFTD01023121.1:1..51, gap(197),AFTD01023122.1:1..573,gap(454),AFTD01023123.1:1..8938, gap(898),AFTD01023124.1:1..792,gap(542),AFTD01023125.1:1..13063, gap(374),AFTD01023126.1:1..16423,gap(77),AFTD01023127.1:1..9619, gap(42),AFTD01023128.1:1..1397,gap(157),AFTD01023129.1:1..5585, gap(1346),AFTD01023130.1:1..26062,gap(190),AFTD01023131.1:1..314, gap(48),AFTD01023132.1:1..1761,gap(49),AFTD01023133.1:1..1064, gap(26),AFTD01023134.1:1..18926,gap(12),AFTD01023135.1:1..54846, gap(59),AFTD01023136.1:1..22903,gap(523),AFTD01023137.1:1..45283, gap(994),AFTD01023138.1:1..16127,gap(426),AFTD01023139.1:1..38071, gap(2726),AFTD01023140.1:1..9844,gap(2148),AFTD01023141.1:1..12007, gap(87),AFTD01023142.1:1..9985,gap(115),AFTD01023143.1:1..31391, gap(26),AFTD01023144.1:1..190,gap(338),AFTD01023145.1:1..39550, gap(10),AFTD01023146.1:1..21574,gap(40),AFTD01023147.1:1..32024, gap(77),AFTD01023148.1:1..90940,gap(57),AFTD01023149.1:1..24334, gap(270),AFTD01023150.1:1..7187,gap(61),AFTD01023151.1:1..517, gap(371),AFTD01023152.1:1..396,gap(108),AFTD01023153.1:1..1470, gap(210),AFTD01023154.1:1..9985,gap(54),AFTD01023155.1:1..80987, gap(20),AFTD01023156.1:1..6077,gap(197),AFTD01023157.1:1..11954, gap(1584),AFTD01023158.1:1..173,gap(1000),AFTD01023159.1:1..414, gap(363),AFTD01023160.1:1..676,gap(228),AFTD01023161.1:1..478, gap(5205),AFTD01023162.1:1..13521,gap(81),AFTD01023163.1:1..34065, gap(125),AFTD01023164.1:1..120,gap(85),AFTD01023165.1:1..12453, gap(49),AFTD01023166.1:1..66551,gap(21),AFTD01023167.1:1..3605, gap(477),AFTD01023168.1:1..113,gap(104),AFTD01023169.1:1..84438, gap(26),AFTD01023170.1:1..21571,gap(309),AFTD01023171.1:1..8470, gap(10),AFTD01023172.1:1..16786,gap(37),AFTD01023173.1:1..30223, gap(56),AFTD01023174.1:1..25766,gap(10),AFTD01023175.1:1..10685, gap(667),AFTD01023176.1:1..27308,gap(718),AFTD01023177.1:1..802, gap(1133),AFTD01023178.1:1..51,gap(202),AFTD01023179.1:1..659, gap(834),AFTD01023180.1:1..200,gap(144),AFTD01023181.1:1..3397, gap(88),AFTD01023182.1:1..50516,gap(161),AFTD01023183.1:1..5980, gap(8238),AFTD01023184.1:1..4310,gap(10),AFTD01023185.1:1..84831, gap(196),AFTD01023186.1:1..70840,gap(2231), AFTD01023187.1:1..196987,gap(70),AFTD01023188.1:1..9073,gap(403), AFTD01023189.1:1..6254,gap(52),AFTD01023190.1:1..659,gap(97), AFTD01023191.1:1..13353,gap(16),AFTD01023192.1:1..1998,gap(43), AFTD01023193.1:1..27092,gap(10),AFTD01023194.1:1..2066,gap(89), AFTD01023195.1:1..42964,gap(1292),AFTD01023196.1:1..33816,gap(624), AFTD01023197.1:1..19738,gap(64),AFTD01023198.1:1..50116,gap(31), AFTD01023199.1:1..70980,gap(34),AFTD01023200.1:1..258,gap(626), AFTD01023201.1:1..51,gap(36),AFTD01023202.1:1..226,gap(321), AFTD01023203.1:1..198,gap(546),AFTD01023204.1:1..2829,gap(375), AFTD01023205.1:1..8438,gap(12),AFTD01023206.1:1..507,gap(1685), AFTD01023207.1:1..10834,gap(26),AFTD01023208.1:1..2935,gap(964), AFTD01023209.1:1..38870,gap(328),AFTD01023210.1:1..203,gap(195), AFTD01023211.1:1..318,gap(294),AFTD01023212.1:1..770,gap(517), AFTD01023213.1:1..1060,gap(76),AFTD01023214.1:1..43257,gap(538), AFTD01023215.1:1..63202,gap(308),AFTD01023216.1:1..76908,gap(1027), AFTD01023217.1:1..16263,gap(354),AFTD01023218.1:1..20772,gap(76), AFTD01023219.1:1..48452,gap(10),AFTD01023220.1:1..52128,gap(400), AFTD01023221.1:1..25525,gap(1975),AFTD01023222.1:1..141,gap(389), AFTD01023223.1:1..81287,gap(80),AFTD01023224.1:1..23868,gap(161), AFTD01023225.1:1..6949,gap(278),AFTD01023226.1:1..5623,gap(22), AFTD01023227.1:1..6958,gap(491),AFTD01023228.1:1..4223,gap(14), AFTD01023229.1:1..3968,gap(33),AFTD01023230.1:1..9816,gap(10), AFTD01023231.1:1..3829,gap(107),AFTD01023232.1:1..35085,gap(699), AFTD01023233.1:1..24220,gap(57),AFTD01023234.1:1..82503,gap(59), AFTD01023235.1:1..13918,gap(994),AFTD01023236.1:1..287,gap(1109), AFTD01023237.1:1..7874,gap(474),AFTD01023238.1:1..108081,gap(367), AFTD01023239.1:1..2853,gap(545),AFTD01023240.1:1..49989,gap(10), AFTD01023241.1:1..10649,gap(32),AFTD01023242.1:1..231,gap(16), AFTD01023243.1:1..33815,gap(1149),AFTD01023244.1:1..177,gap(292), AFTD01023245.1:1..16574,gap(197),AFTD01023246.1:1..8845,gap(10), AFTD01023247.1:1..9751,gap(100),AFTD01023248.1:1..10472,gap(54), AFTD01023249.1:1..31606,gap(10),AFTD01023250.1:1..154,gap(1708), AFTD01023251.1:1..197,gap(3468),AFTD01023252.1:1..37114,gap(247), AFTD01023253.1:1..3670,gap(52),AFTD01023254.1:1..78478,gap(17), AFTD01023255.1:1..1183,gap(73),AFTD01023256.1:1..111958,gap(256), AFTD01023257.1:1..100668,gap(19),AFTD01023258.1:1..20761,gap(204), AFTD01023259.1:1..210,gap(78),AFTD01023260.1:1..64637,gap(43), AFTD01023261.1:1..197307,gap(3031),AFTD01023262.1:1..53505, gap(168),AFTD01023263.1:1..48053,gap(152),AFTD01023264.1:1..1186, gap(67),AFTD01023265.1:1..110631,gap(17),AFTD01023266.1:1..131, gap(10),AFTD01023267.1:1..75147,gap(107),AFTD01023268.1:1..42097, gap(10),AFTD01023269.1:1..7634,gap(274),AFTD01023270.1:1..19692, gap(3338),AFTD01023271.1:1..15630,gap(43),AFTD01023272.1:1..68313, gap(114),AFTD01023273.1:1..5827,gap(58),AFTD01023274.1:1..15214, gap(158),AFTD01023275.1:1..79579,gap(13),AFTD01023276.1:1..3184, gap(2054),AFTD01023277.1:1..196,gap(2070),AFTD01023278.1:1..214, gap(888),AFTD01023279.1:1..18329,gap(77),AFTD01023280.1:1..14611, gap(289),AFTD01023281.1:1..35633,gap(271),AFTD01023282.1:1..229, gap(237),AFTD01023283.1:1..169,gap(651),AFTD01023284.1:1..248, gap(196),AFTD01023285.1:1..404,gap(86),AFTD01023286.1:1..501, gap(652),AFTD01023287.1:1..653,gap(986),AFTD01023288.1:1..35613, gap(166),AFTD01023289.1:1..2023,gap(206),AFTD01023290.1:1..306, gap(329),AFTD01023291.1:1..2898,gap(95),AFTD01023292.1:1..34816, gap(51),AFTD01023293.1:1..47678,gap(10),AFTD01023294.1:1..11209, gap(5448),AFTD01023295.1:1..15009,gap(3846), AFTD01023296.1:1..11742,gap(5436),AFTD01023297.1:1..10055,gap(156), AFTD01023298.1:1..34150,gap(130),AFTD01023299.1:1..17553,gap(61), AFTD01023300.1:1..42535,gap(13),AFTD01023301.1:1..5035,gap(943), AFTD01023302.1:1..145,gap(174),AFTD01023303.1:1..408,gap(365), AFTD01023304.1:1..8547,gap(44),AFTD01023305.1:1..723,gap(777), AFTD01023306.1:1..36598,gap(73),AFTD01023307.1:1..100,gap(113), AFTD01023308.1:1..200564,gap(13),AFTD01023309.1:1..84761,gap(20), AFTD01023310.1:1..50384,gap(35),AFTD01023311.1:1..116057,gap(288), AFTD01023312.1:1..5147,gap(12),AFTD01023313.1:1..8403,gap(184), AFTD01023314.1:1..23990,gap(30),AFTD01023315.1:1..16145,gap(83), AFTD01023316.1:1..990,gap(37),AFTD01023317.1:1..231,gap(158), AFTD01023318.1:1..53680,gap(48),AFTD01023319.1:1..74360,gap(96), AFTD01023320.1:1..10660,gap(12),AFTD01023321.1:1..12570,gap(580), AFTD01023322.1:1..91720,gap(44),AFTD01023323.1:1..42386,gap(297), AFTD01023324.1:1..24882,gap(200),AFTD01023325.1:1..104,gap(90), AFTD01023326.1:1..741,gap(34),AFTD01023327.1:1..42045,gap(41), AFTD01023328.1:1..29804,gap(1727),AFTD01023329.1:1..23824) //