LOCUS JF713719 2833 bp DNA circular VRL 02-NOV-2011 DEFINITION Po-Circo-like virus 51, complete genome. ACCESSION JF713719 VERSION JF713719.1 KEYWORDS . SOURCE Po-Circo-like virus 51 ORGANISM Po-Circo-like virus 51 Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae. REFERENCE 1 (bases 1 to 2833) AUTHORS Shan,T., Li,L., Simmonds,P., Wang,C., Moeser,A. and Delwart,E. TITLE The fecal virome of pigs on a high-density farm JOURNAL J. Virol. 85 (22), 11697-11708 (2011) PUBMED 21900163 REFERENCE 2 (bases 1 to 2833) AUTHORS Shan,T., Li,L. and Delwart,E. TITLE Direct Submission JOURNAL Submitted (22-MAR-2011) Blood Systems Research Institute, Department of Laboratory Medicine, University of California-San Francisco, San Francisco, CA 94118, USA FEATURES Location/Qualifiers source 1..2833 /organism="Po-Circo-like virus 51" /mol_type="genomic DNA" /isolation_source="porcine stool" /host="Sus scrofa" /db_xref="taxon:1105386" /geo_loc_name="USA" /collection_date="2010" CDS 23..985 /codon_start=1 /product="rep" /protein_id="AER30030.1" /translation="MSSKRVIATRWVFTINNFTQEDEEAVINLPDQDWCKSVIAEEEH LEDGTPHIQGYMVTSRKDRSAISKYLNSHAYIEVARGSSYDNWEYCSKEDQIIVEYNK PSQADNKPHRSLTRNQEETLSFLESCKTFTRDQMIEQYPCLYARHYQLYEKLHSEYAI RSIDTYDGRLHDKNLWIYGPAGSGKTTLALSDIEHYKVYLKPINKWWDGFNPNYHERI LIDDFPEGATASILAPFVKHWGDRFPYNAEVKNGSTVINPSIPVIITSNYSIDETFDR QQDRDAVRRRFQEIYLDGSQSHLPYYCHLDLLYSRIRSGEINKE" CDS 1213..1737 /codon_start=1 /product="unknown" /protein_id="AER30031.1" /translation="MYGRRSYRPRRSYARAVKPVKYSNETFNAAFAYVWASTPTTSMV TMIPAVESLGMRKVKNFTLSITQSPTLDSSSTVKAASSFMYALVYLPDGVTANTLSIG NSTAASLYEPNQNVIASGVCSSNNGQFRLSSRLARNLNSGDRVVLLLRPTASQGTAGD LTNISVVLNYSITY" CDS 1751..2353 /codon_start=1 /product="unknown" /protein_id="AER30032.1" /translation="MYNRNYYSRRGRTIERKKTEVSPVIRPELVNVYYNYLKDNGLIP EPPAPIEDGSYVTYHIDQVYSFPTSITSLNSALGSLLDTFEVPVDITEVDSIRLEYTL TPSSSSSSYRPFNMFSSSADDSGYARYDSLPTGTLSPLKYTLFFYRTSASTFVVSIYD MKNEFYMVPTPAPLSYVSKFDDTGSTMVVKSITVSTYANE" BASE COUNT 832 a 625 c 559 g 817 t ORIGIN 1 gctaacattt cataattaac aaatgtcttc taaaagagtc atcgctactc gttgggtatt 61 cacgatcaac aactttaccc aagaagatga agaggcagtc attaaccttc cagatcagga 121 ttggtgcaaa tcagtcatag cagaagaaga acatctcgaa gatggtacac cacacatcca 181 aggatacatg gttacatccc gcaaagatag atcagctata tccaagtact tgaacagtca 241 tgcatacatt gaagtagcac gtggttcatc atacgataat tgggaatatt gctcaaaaga 301 agatcagatc atagttgaat ataacaaacc ttctcaagca gataacaagc cacataggtc 361 attgacacgc aatcaggaag aaactttgtc ctttcttgaa tcatgtaaga cgtttactag 421 agatcagatg atagaacagt atccatgttt atatgcaaga cattatcagt tatacgaaaa 481 gcttcattcg gaatatgcaa ttcgatcgat cgatacttat gatggacgat tacatgataa 541 gaacttatgg atatacggcc ctgcgggttc tgggaagaca acccttgctc tctcggacat 601 cgaacattac aaggtatacc tcaagccaat caacaaatgg tgggatggtt tcaaccccaa 661 ctaccacgaa aggatcctca ttgatgactt tcctgaagga gctaccgcat ctatactcgc 721 ccccttcgtg aaacactggg gtgatcgttt tccatacaac gcagaagtta agaatgggtc 781 aacggttatc aacccctcaa tcccggtcat cattacgagc aactattcca tcgacgaaac 841 tttcgataga cagcaagaca gagatgcagt ccgccgtcga ttccaggaaa tctacctcga 901 tggaagtcag tcccacctgc cctattattg tcacctcgac ttgttgtact cgcgtatcag 961 aagcggagaa ataaacaaag aataaaaggt tagtttacaa tggacaaata tttaaccctt 1021 ggggccccaa gtagtttacg tattggggat atggggttaa ggggttgatc cccttatcct 1081 gtgcccgcca gcgaagcgct aggaggagag cccgtcgagg agctgtgcga cgctgacatt 1141 gggggcttcc acccctaata gaagatgtat tgacattagc aatagttagt gtttagttat 1201 tcattaatca ttatgtacgg cagacgtagt tacagaccac gtagatcata tgctagagca 1261 gttaagccgg ttaagtatag caatgaaaca ttcaatgctg cttttgccta tgtgtgggca 1321 tcaactccaa caacatccat ggtcaccatg atcccagcag ttgaatcact tggtatgcgt 1381 aaggttaaga acttcactct tagcatcaca cagtcaccca cacttgattc atcatccact 1441 gttaaggcag cttcctcgtt catgtatgca cttgtttatc tgccagatgg agtcacagcc 1501 aatacactct caattggaaa ttcaacagca gctagtttat atgagccaaa tcaaaatgtt 1561 atagcaagtg gagtatgcag ttcaaacaat ggtcagttca gattgtcatc tcgcttagca 1621 aggaatctca attcaggtga tcgtgttgtc cttttactca gaccaacagc atctcaggga 1681 acagcaggtg atcttacaaa tatcagtgtt gtcctcaact atagtatcac atattaagta 1741 aacagtcatt atgtacaatc gcaactacta ttcgcgtcgt ggtagaacta tcgaaagaaa 1801 gaaaacagaa gtcagtccgg tgattagacc agagttggtt aatgtttatt acaattatct 1861 caaggacaat ggtttaattc cagaacctcc tgcaccaata gaagatggta gttatgtcac 1921 atatcacata gatcaggtat attcatttcc tacttcaata acatctctta attcagccct 1981 tggtagcttg ttagatacat ttgaggtacc tgttgatatt acagaggtag atagtattag 2041 gctagagtac acattgacac cttctagttc atcttcatcc tatcgtccgt ttaatatgtt 2101 ctcgtcatca gcagatgatt ctggttatgc tagatatgat tctcttccaa ctggtacgtt 2161 atcacctctt aagtacactt tgttcttcta tcgtacatca gccagtacgt ttgttgtttc 2221 gatatatgac atgaagaatg aattttacat ggttccaaca ccagcccccc tttcatacgt 2281 tagtaagttc gatgatacgg gttccacaat ggtcgttaaa tcaatcacag tttcgacata 2341 cgccaatgaa taaactctta gtttcacctc ctcgttttaa cggttcggtt ctcttgttat 2401 ttgataaccc cggcgcagct cgtgagcacg gggtctaggg gggcttgtcc cccctcctac 2461 gtagattccc cctcactcgt tcggttgttc ggattcgttt ggttgtttgg ttctcttggt 2521 tggtacgtcc cctagtggta agtggcgtcg taaaggtcca agcggagcgc gtcgaagaca 2581 ttattacctt tacagccact attcggcaca agaattttga atggtttacg ttgaaataac 2641 cgctaaatgg tctcaatttt tccacttttt gaatacgtgt cgatttatct cagatcagca 2701 caagaaattg aatactttac gtcatggttt tcgacacaaa atctacttta catcgctaga 2761 tcgacacaaa atctacttta catcgctaga tcgacacacg gtctacttta cgttcttttt 2821 ggataacctt aag //