LOCUS JARO02019418 3572 bp DNA linear VRT 13-OCT-2015 DEFINITION Scleropages formosus scaffold19423, whole genome shotgun sequence. ACCESSION JARO02019418 JARO02000000 VERSION JARO02019418.1 DBLINK BioProject: PRJNA232741 BioSample: SAMN02592717 KEYWORDS WGS. SOURCE Scleropages formosus (Asian bonytongue) ORGANISM Scleropages formosus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages. REFERENCE 1 (bases 1 to 3572) AUTHORS Tan,M.H., Gan,H.M., Croft,L.J. and Austin,C.M. TITLE The genome of the Asian arowana (Scleropages formosus) JOURNAL Unpublished REFERENCE 2 (bases 1 to 3572) AUTHORS Tan,M.H., Gan,H.M., Croft,L.J. and Austin,C.M. TITLE Direct Submission JOURNAL Submitted (20-JAN-2014) School of Science, Monash University Malaysia, Jalan Lagoon Selatan, Bandar Sunway, Petaling Jaya, Selangor 46150, Malaysia REFERENCE 3 (bases 1 to 3572) AUTHORS Tan,M.H., Gan,H.M., Croft,L.J. and Austin,C.M. TITLE Direct Submission JOURNAL Submitted (05-AUG-2015) School of Science, Monash University Malaysia, Jalan Lagoon Selatan, Bandar Sunway, Petaling Jaya, Selangor 46150, Malaysia COMMENT ##Genome-Assembly-Data-START## Assembly Method :: MSR-CA v. 1.4 Assembly Name :: aro_v2 Genome Coverage :: 80.0x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..3572 /organism="Scleropages formosus" /mol_type="genomic DNA" /isolate="aro1" /isolation_source="freshwater" /db_xref="taxon:113540" /geo_loc_name="Malaysia: Jelebu, Negeri Sembilan" /collected_by="R. Siow" assembly_gap 224..346 /estimated_length=123 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(1071..3572) /locus_tag="Z043_125656" mRNA complement(join(1071..1514,1862..2195,2431..3572)) /locus_tag="Z043_125656" /product="ras-related protein Rap-2c-like" /inference="ab initio prediction:MAKER:2.31.8" /note="similar to AA sequence, XP_004073190" CDS complement(join(1917..2195,2431..2703)) /locus_tag="Z043_125656" /inference="ab initio prediction:MAKER:2.31.8" /note="similar to AA sequence, XP_004073190; GO_component: GO:0005622 - cellular bud scar [Evidence IEA]; GO_component: GO:0015031 - Cajal body [Evidence IEA]; GO_function: GO:0005525 - ATP binding [Evidence IEA]; GO_function: GO:0016020 - peptidoglycan receptor activity [Evidence IEA]; GO_process: GO:0007165 - establishment of tissue polarity [Evidence IEA]; GO_process: GO:0007264 - nitric oxide mediated signal transduction [Evidence IEA]" /codon_start=1 /product="ras-related protein Rap-2c-like" /protein_id="KPP56701.1" /db_xref="GI:938042730" /db_xref="InterPro:IPR001806" /db_xref="InterPro:IPR003578" /db_xref="InterPro:IPR003579" /db_xref="InterPro:IPR005225" /db_xref="InterPro:IPR020849" /db_xref="InterPro:IPR027417" /translation="MKEYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEI EVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIRPMRDQIVR VKRYEKVPLILVGNKVDLESEREVPCSEGRALAQEWGCPFIETSAKSKTMVDELFAEI VRQMNYTVLPEKQEQCCTSCTVQ" assembly_gap 3088..3093 /estimated_length=6 /gap_type="unknown" BASE COUNT 1107 a 741 c 722 g 873 t ORIGIN 1 tcaagaaggg tctgaaaact caccttttcc agacacactg cacccatgta tggtgtaaat 61 gtgcatcatg caccatagct ttacgatcat gtccagataa gcctttacag aaccactact 121 cctgtattgc atataaatgg ttgtgtacct ttctttaaaa aaaaaaaaaa aatgtgtagg 181 aaggtgatca gtattagtct atcctgagtt ttgtgcacct actnnnnnnn nnnnnnnnnn 241 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 301 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnntgga gaaaagcatc 361 tgctaaatga ataaatgtaa atggacataa aactttagac aattcaatgt acaaatttta 421 ttacaacctg atgaaacccc ataaagtagt tgatttcaac aaaataaaaa cttaacatat 481 gcacagatga acacctctct gttaaactat gtggttccca taagagccaa tggacaccag 541 ttctgcaaat gaggagcatt attggctgat aatggaaaac catttaaaaa aaaaacaaaa 601 caaaaaaaac atttgtatgg tatacagcag aatgaatgta gcaacttagt ttattactac 661 aaaccaattg cataaaaaag taaaaaaacc tgtacttttc aaatcacacc atcatcatct 721 gctttatatt ccatagaaac aaaaaacaca tgccagtaaa gctgtgatat tttaaagtgc 781 aataaaaata tcaagctatt caataatcag atctgaatat ggcgggacag gacaaagcta 841 tctgaacaat caaataatca taattcctga aaaattcaaa ggcacccttc tcagcagctg 901 actgatgttg tagagtgtta aatttatcag gtgtatctca tgatgttgtg acacagtaca 961 gagcacttgc aggggggcaa aaagtgaaga acaccttggg tttgtagagc ttagcattgc 1021 tcagaaacaa aataaaatag agaggatatt cagtttttca ggaatcacgt cagaaagatg 1081 gaaattacac atttaaggct caatcagatc tccatcaaaa atgacttgtt acaaaagtta 1141 agtatttaat actgtaatta aatacttcag atatttaagc attgaaaaat taaggtaaag 1201 ttgaatgaaa ttaaatttta atgtttaaaa tcaaatacaa aacatggtat aaaatgcaga 1261 cattgcagag ataaggttaa cacttccaat ctatccaatt aataaaaaaa ccctcagatc 1321 agactgcagt atgtatgtgc atgtggttga gcacgaagaa taagaaatca agagtttgta 1381 aaaaggctca tttcactcca caattggttt gtgttatggc tctggatgta gaacggtcat 1441 cctcgggatg aacgccggag gaaaaggcag ggagtttgtc gtcagtggtg cagcttggga 1501 tgttgtagtg tttcctataa gttgacacac gagggacaag aaacaaacat cgttatatcc 1561 tgttgcagga catttttcat cttaaaacac aagttgtgtg ttttttaaaa aaaaatttca 1621 aatatgccaa atatatgcaa accaagaggc cccaactaac tcccagaaag atgaaactag 1681 gatggactat accagccttc atgaaaataa atatactaca ctgccaaata tgtcatcatc 1741 atgtgagagg acaataatac tttttaacaa gtgaagaaaa attctgataa agtacttaaa 1801 taggaacaca gttctctcaa tgggtcagtg ccctttcatt ctagtgcatt actgtgctca 1861 cctgtgcaac cgtagcagcg tctccagctc taacccagga ggccagcctg ggcagctcac 1921 tgtacagtac aggaggtgca gcactgctcc tgcttctctg gcagcaccgt gtagttcatc 1981 tgtcgcacaa tctcagcaaa cagctcatcc accatggtct tgctcttggc tgaagtctcg 2041 ataaaagggc aaccccattc ctgcgccaag gcccgtcctt cagagcatgg aacctctcgc 2101 tctgactcca agtcgacctt gttacccaca aggatgaggg gcaccttctc gtatcgtttc 2161 acccgcacaa tttggtcacg cattggcctg atgtcctaga atgggggggg agatgaaatg 2221 gcataacagt ggtctcacaa ttaccttgtg catctctgac taaacactgt cagactgact 2281 aacaaaggta aaaacactca tttaaaatta atttattctc tttaaaactt cagaagtttt 2341 tgcgtttcga aaaattcttt aacgatgact tcgtaggtta tctaacatgt agtagcttgt 2401 tccgcatagc tcatttcttt gttttcatac ctgaaaagac tgctggttga ctaaactgta 2461 gaccaagatg aagccctggc cgttttttat atacagatct ctcatggagg caaactgctc 2521 cgtccccgcg gtgtccagaa tctccagaac cgagggagaa gaatccactt cgatttcttt 2581 gcggtagaag tcttcgatgg tcgggtcata cttctctatg aacgttccgg tgacaaactg 2641 aacggtgagg gcggactttc ccacgccgcc gctccccaga accaccacct tgtactcctt 2701 cattggggcc cgccggggtg tgctgatctg gaatcacctc tggacaccat aaatcccaca 2761 ccagctggaa gcagccagac tcaaaacacc cacccttttg atcaatacat gtataatggc 2821 tggctacacc taactgtgta tgctgcgggt tgcttcggat gcacacagct caagtgatgc 2881 taacgaggct caaccggcac taactcagcc gtgcgcgtga acgcagagcg cgcgtgcacg 2941 cgagctcccg caaaaaaagc cgaccactcc tgcccctcgc atacaagtct cattgggcat 3001 agataggaag ggaaggaaaa gtaaatttca gtaaaaactc accagacgtg aaaaatataa 3061 tatatgcagt gtctatcggg gggggggnnn nnnaataaaa cacacagcgc cggtgaagcc 3121 ggagaaacgc agcacctggg cggctgagct tgagaggagg aggaagtgga tggctagcta 3181 ctaaattagc aaagttagct accaacccgc ttgctctaat actagttctt aaactgcgac 3241 aacaaaatat cgcagtggtt gttgtcggct gaataaaatt acgaatttct gtgtgattat 3301 tcctagctta cccggccgtg ggaaaggccc agcgggtgag tttttgaact atactggctg 3361 tcgagagcta aaagaagaga gagatagcta gtcgcgtccc acggaagcgt ttcctgaaca 3421 ggcgcagcag gagagcgcac tgccgcactg ataccgaacg ccggcgcgtg atctcactag 3481 ttttcgcgta caaaattaga acacggtggt ccggagcaac cggagaacaa acggtgaacg 3541 aagtgggtgc agcccgacca gccccgttcg tt //