LOCUS ASTSSP12S 3250 bp DNA linear PLN 08-DEC-2015 DEFINITION Avena sativa 12S seed storage globulin gene, partial sequence. ACCESSION J05485 VERSION J05485.2 KEYWORDS 12S globulin; storage protein. SOURCE Avena sativa (oats) ORGANISM Avena sativa Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Poodae; Poeae; Poeae Chloroplast Group 1 (Aveneae type); Aveninae; Avena. REFERENCE 1 (bases 1 to 3250) AUTHORS Shotwell,M.A., Boyer,S.K., Chesnut,R.S. and Larkins,B.A. TITLE Analysis of seed storage protein genes of oats JOURNAL J. Biol. Chem. 265 (17), 9652-9658 (1990) PUBMED 2351662 REFERENCE 2 (bases 1 to 3250) AUTHORS Shotwell,M.A., Boyer,S.K., Chesnut,R.S. and Larkins,B.A. TITLE Direct Submission JOURNAL Submitted (17-APR-1990) Dept. of Plant Sciences, University of Arizona, Tucson, AZ 85721, USA REFERENCE 3 (bases 1 to 3250) AUTHORS Shotwell,M.A., Boyer,S.K., Chesnut,R.S. and Larkins,B.A. TITLE Direct Submission JOURNAL Submitted (08-DEC-2015) Dept. of Plant Sciences, University of Arizona, Tucson, AZ 85721, USA REMARK Sequence update by database staff to remove vector contamination COMMENT On Dec 8, 2015 this sequence version replaced J05485.1. Original source text: A.sativa (genomic library lambda-Charon-34), clone lambda-OG1-E1. Draft entry and computer-readable sequence for [1] kindly submitted by M.A.Shotwell, 17-APR-1990. FEATURES Location/Qualifiers source 1..3250 /organism="Avena sativa" /mol_type="genomic DNA" /db_xref="taxon:4498" gene 885..>3250 /gene="12S seed storage globulin" regulatory 885..890 /regulatory_class="other" /gene="12S seed storage globulin" /note="CAT box" regulatory 917..921 /regulatory_class="TATA_box" /gene="12S seed storage globulin" exon 983..1310 /gene="12S seed storage globulin" /number=1 intron 1311..1427 /gene="12S seed storage globulin" /note="intron A" exon 1428..1702 /gene="12S seed storage globulin" /number=2 intron 1703..1828 /gene="12S seed storage globulin" /note="intron B" exon 1829..2344 /gene="12S seed storage globulin" /number=3 intron 2345..2444 /gene="12S seed storage globulin" /note="intron C" exon 2445..2882 /gene="12S seed storage globulin" /number=4 regulatory 2915..2920 /regulatory_class="polyA_signal_sequence" /gene="12S seed storage globulin" regulatory 2965..2970 /regulatory_class="polyA_signal_sequence" /gene="12S seed storage globulin" BASE COUNT 1024 a 656 c 581 g 989 t ORIGIN 1 bp upstream of EcoRI site. 1 gaattctttt tggaaagtca ttttgcctcc tgaactccag tgtttcctat ttattaaaaa 61 aaactaaaaa ctatatttat aagtttgaaa aaatcatgaa acaaaattgt aaaaattgct 121 agtgatatat cccacaaacg tgcaaaatct caatttgaag tgctttgtat ttcgagctac 181 acaaaaatga caaagtgtga ctttttatgt gatttgaaat cactatacta cagatctaca 241 attttgttct ttttgtgaag ctataaatac acattatttt gagttgagat ttttcatgtt 301 tgtgctatga atcataggct acatcctgat ttatttttag aattttttgg aacctaaaat 361 atgttctaga ttatttttta aaaagtggga tcattgatgc ccatacacac gaaatctcca 421 ctcaattctt ttatacatta tctttctata tctactaacg tggattatac atcatagtaa 481 gtttcttact acatgtgctt tcttgttaca atgtggacat gactcttcca cttttgggct 541 ttatgttgta tggatatact catgacatgg aattttgtcc acacacgtag aaccatccat 601 atatattgtt gtgcatagaa caaaacacaa gcaagccatg aaaaaggagt cacaggtgcc 661 acaaactgtt gtaggaagta taactagtat gaggcctttt atttgacgtc ggacaatggc 721 caagagctac atataaaaga tggtgctaga tttgtgagtc agcaccagct gtaggcagaa 781 aacaacacat atcttttgag acaaagttat atctattcac atttaaaacc atgatctgtt 841 gagtcaccat gaatatcttc ttatctatgt taataattac atgtcatcat gtttatcctg 901 gactactttt tatggctata aaatcaaact tacaataagg aaactagcac caatccacct 961 tctacaatct cttcaaacaa tcatggcaac tactaggttt ccatcattgt tgttttactc 1021 ctatattttt ctcttgtgca atgggtcaat ggctcagcta ttcgggcaga gctttacccc 1081 atggcaaagc tctcgacaag gaggtttaag ggggtgcaga tttgataggc tacaagcatt 1141 tgaaccactt cgacaagtgg ggtcacaagc gggtatcatt gagtactttg atgagcagaa 1201 tgagcaattt cgttgtgcag gtgtatccgt catccgtcgt gttattgagc ctcaaggcct 1261 cttgttacct caataccaca acgctcctgg cttggtgtac atccttcaag gttagtgtct 1321 aattgattat aaaaattgcc tttgttatac ttcacttagg atttagatgt gccaaatgtt 1381 acaccgttca tattttttaa caatgaaaca aatgtgtttt cttttaggta ggggattcac 1441 agggttgact ttccctggat gcccggcgac cttccaacaa cagttccaac catttgatca 1501 agcccagttt gctgaaggtc aaagccaaag ccaaaatctt aaggatgaac accaaagagt 1561 tcaccacatc aaacaaggag atgttgttgc tctaccggct ggcatagtac actggtgcta 1621 caacgatggt gatgcaccga ttgtagctgt ctatgtcttc gacgtaaaca acaacgctaa 1681 tcagcttgaa ccaaggcaaa aggtaactat acaacttaat gcacacaaaa tatatacaac 1741 tatttacaag tgatccaact atgatttgaa gtatacatta gtgggatatt aatgaactct 1801 gtttaacttc atcgatataa aattttagga gttcttgttg gctggtaaca acaagagaga 1861 gcaacagttt ggacaaaaca tattcagtgg attcagtgtc caacttctta gtgaggccct 1921 tggtataagt cagcaagtag cacaaaagat tcagagtcaa aatgaccaaa gaggtgagat 1981 aattcgtgtg agtcaaggcc ttcaattctt gaagcctttt gtttcccaac aaggaccagt 2041 agagcatcaa gcctaccaac caattcaaag tcaagaagaa caatcaaccc aataccaggt 2101 agggcaatca ccacaatatc aagaaggaca atcaactcaa taccagccag gacagtcatg 2161 ggaccaaagt ttcaatggtt tggaggagaa tttctgttca ttggaggcaa ggcaaaacat 2221 cgaaaacccg aaacgtgccg acacgtacaa cccacgtgct ggcaggataa cacatctcaa 2281 tagcaagaat tttcccaccc ttaacctggt gcaaatgagt gctacaagag taaatttata 2341 ccaggtattt atgatactac attcaacaca ctatcttatt tttagatatt ctaagcttca 2401 tacaaccgat taataatatg gcatacaaat aattgctatt gcagaatgct attctttcac 2461 catactggaa cattaatgct cacagtgtca tgcacatgat ccaaggacgt gctcgagttc 2521 aagttgtcaa taaccatggt cagaccgtat tcaatgacat tcttcgtcgc ggacaactgc 2581 taatcatacc acaacactat gttgttctca agaaggcaga gcgtgaagga tgccagtata 2641 tttcattcaa gaccaacccc aattccatgg ttagccagat cgcaggaaag acctccatcc 2701 tacgtgcatt gcccgttgat gtcctcgcca atgcataccg catttctaga caggaagccc 2761 aaaacctcaa aaataaccgt ggagaagagt ttgatgcatt cacccctaag tttacacaaa 2821 cgggctccca gagttaccag gacgaggggg agtcatcttc gactgagaag gcatccgagt 2881 gaataagtga gtgtaatgga aactagtata gtgaaataaa ggcatcgcat gtttgcagcc 2941 tagtggtata taaccgctta tctcaataaa aaagtttctc cgtgttatat tgtttgcttg 3001 tttcttgtac tcttcttaat tttatctttt atgatcaacc aacttacctc tcttcttcaa 3061 ttttctgcca ctcttcacat atgcatatca aggagacgta tagtccactt gtactagatt 3121 tattttttgg tactatcttt tgtggtttga gtatttctta ggtccgataa aaacattcaa 3181 tttactgatg ctaaattttt tcagcaaacc tagccaccta aaattgtgaa tcacatacct 3241 tcaaatttct //