LOCUS       HQ131847                1022 bp    DNA     linear   PLN 11-JAN-2013
DEFINITION  Hieracium intybaceum clone 13 squalene synthase (SQS) gene, exons 4
            through 9 and partial cds.
ACCESSION   HQ131847
VERSION     HQ131847.1
KEYWORDS    .
SOURCE      Hieracium intybaceum
  ORGANISM  Hieracium intybaceum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Cichorioideae; Cichorieae; Hieraciinae; Hieracium.
REFERENCE   1  (bases 1 to 1022)
  AUTHORS   Krak,K., Alvarez,I., Caklova,P., Costa,A., Chrtek,J. and Fehrer,J.
  TITLE     Development of novel low-copy nuclear markers for Hieraciinae
            (Asteraceae) and their perspective for other tribes
  JOURNAL   Am. J. Bot. 99 (2), E74-E77 (2012)
   PUBMED   22301891
REFERENCE   2  (bases 1 to 1022)
  AUTHORS   Krak,K., Alvarez,I., Caklova,P., Costa,A., Chrtek,J. and Fehrer,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-AUG-2010) Institute of Botany, Academy of Sciences of
            the Czech Republic, Zamek 1, Pruhonice 25243, Czech Republic
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Hieracium intybaceum"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:268054"
                     /clone="13"
     gene            <1..>1022
                     /gene="SQS"
     mRNA            join(<1..35,152..221,374..517,598..702,781..927,
                     1004..>1022)
                     /gene="SQS"
                     /product="squalene synthase"
     CDS             join(<1..35,152..221,374..517,598..702,781..927,
                     1004..>1022)
                     /gene="SQS"
                     /codon_start=1
                     /product="squalene synthase"
                     /protein_id="ADR66132.1"
                     /translation="HVSAAFLELKKGYQEAIEDITMRMGAGMAKFICKEVETIDDYDE
                     YCHYVAGLVGLGLSKLFHAGGTEKLFPDSISNSMGLFLQKTNIIRDYLEDINEIPKSR
                     MFWPREIWSKYVNKLEELKYEENSEKAVQCLNDMVTNALIHIEDCLKYMSELRDPAIF
                     RFCAIPQIMAIGT"
     exon            <1..35
                     /gene="SQS"
                     /number=4
     exon            152..221
                     /gene="SQS"
                     /number=5
     exon            374..517
                     /gene="SQS"
                     /number=6
     exon            598..702
                     /gene="SQS"
                     /number=7
     exon            781..927
                     /gene="SQS"
                     /number=8
     exon            1004..>1022
                     /gene="SQS"
                     /number=9
BASE COUNT          360 a          146 c          170 g          346 t
ORIGIN      
        1 catgtttctg ctgcctttct ggagcttaag aaagggtaaa ttttacataa aaactattgc
       61 tttctggaac aattaatcat ctagaatttt gacaaaaaaa caattgtact aagtaacaat
      121 tataataata acaacaacaa ttatattgca gttatcagga ggcaattgag gatataacca
      181 tgagaatggg tgcaggaatg gcaaaattca tctgtaaaga ggtacttatc atcataatta
      241 aaacacaaga aatagcagtg tacttatatt catataactg gttacagttt atataacgtt
      301 ctaatagaaa gtacaatgct ataactagca aggttgttta atacaaatat taattttaaa
      361 ttcaaatttt caggttgaga caattgatga ttatgatgag tattgtcact atgttgctgg
      421 acttgttgga ttagggttgt caaaactctt ccatgcagga ggaactgaaa aattatttcc
      481 agattccatc tccaattcca tgggtttatt ccttcaggta ataaaccata catttctgtt
      541 tcttttttac ttataactta ataatagaat tatatattaa tggttgatta attacagaaa
      601 acaaacatta ttagagatta tctcgaggac ataaacgaga tacccaagtc acgcatgttt
      661 tggcctcgtg aaatctggag taaatatgtc aataaactag aggtgcgtgt acagtaagtt
      721 cagtgtttct tgtattctat ttgtaacaaa ttggaacatt tgttaaatga tatgcaatag
      781 gagttgaaat atgaagaaaa ctctgaaaaa gcggttcaat gtctgaatga tatggtgaca
      841 aatgctttaa tccacattga agactgtcta aagtacatgt ctgaattgcg tgatccagct
      901 atcttcaggt tttgtgccat tccacaggta tattatttaa acacaagaaa tagcaacata
      961 ctttcatttc ttaattttac ctttttttta atcttattat cagatcatgg cgattggaac
     1021 aa
//