LOCUS HO650249 523 bp mRNA linear EST 19-JAN-2012
DEFINITION penium_71836_c30453_c Penium margaritaceum EST library Penium
margaritaceum cDNA 5', mRNA sequence.
ACCESSION HO650249
VERSION HO650249.1
DBLINK BioSample: SAMN00169693
KEYWORDS EST.
SOURCE Penium margaritaceum
ORGANISM Penium margaritaceum
Eukaryota; Viridiplantae; Streptophyta; Zygnematophyceae;
Zygnematophycidae; Desmidiales; Peniaceae; Penium.
REFERENCE 1 (bases 1 to 523)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..523
/organism="Penium margaritaceum"
/mol_type="mRNA"
/strain="SKD-2004, CL-18"
/db_xref="taxon:102169"
/clone_lib="SAMN00169693 Penium margaritaceum EST library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 82 a 168 c 174 g 98 t
ORIGIN
1 cttcgctgcg cacaggaatg tccacagcct tcacgctgca tggcagcctt ggctttggct
61 tggccgccgc tgagcccaca gcagtggttg cgctatctgt gcctgtagct gtggctgcat
121 ccgtggccga gcttgtgttt gttgttgtgg ttgtgcttgt gcttgtggtc gcgtccgttg
181 gcgacagcag cgccagcact gaccgcgccc acctagacgt ccacccgcgc tgtgcacctg
241 cggctggggc ttccgggaac gaagaaaatc cctgcgtcag cgcaccgcgc gcgcctcctc
301 cggaaagagc gagcatcacc gccatcgtca gcgcgagagc cgcaaatgag acggccgaag
361 cgtcccggct cgcgccgccg ccgaagcggc aagcgtggag ccgtgcgctc atggctgcct
421 gcgcaggtcg ctcgtctgcr acgcggttga aaggcacaga gaatggaggt ggcttgtcgg
481 cgtcggggac ggctgtgctc ctcacagtag cacggcagac aca
//