LOCUS HO649866 385 bp mRNA linear EST 20-JAN-2012
DEFINITION penium_71836_c36341_c Penium margaritaceum EST library Penium
margaritaceum cDNA 5', mRNA sequence.
ACCESSION HO649866
VERSION HO649866.1
DBLINK BioSample: SAMN00169693
KEYWORDS EST.
SOURCE Penium margaritaceum
ORGANISM Penium margaritaceum
Eukaryota; Viridiplantae; Streptophyta; Zygnematophyceae;
Zygnematophycidae; Desmidiales; Peniaceae; Penium.
REFERENCE 1 (bases 1 to 385)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..385
/organism="Penium margaritaceum"
/mol_type="mRNA"
/strain="SKD-2004, CL-18"
/db_xref="taxon:102169"
/clone_lib="SAMN00169693 Penium margaritaceum EST library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 89 a 111 c 116 g 68 t
ORIGIN
1 aagaagaaga ggatggtggt gcccgacgct ctcaaggtgc tgcgactgaa gccgggccac
61 aagttctgcc tgctcggtcg cctgtcgcac gaggtcggct ggcactactg ggacactgtc
121 aaggagctgg aggcaaagcg caaggagaag tcggcagagt actacaagga gaagaaggag
181 gctctgctca agcgcagcaa ggcggagaag tctgtgctgg aggccaacac cgacattgcc
241 tccgtgctca ctccctcagc tacaccgcct gccaaccaac cacccgcctt agtaaccaaa
301 ctagccgacc gaccacgtct gacttcttgc ccgtcgtccg ccgtcgtagg tcttctaaka
361 ggaaggtgtt gggaggtgtt tctag
//