LOCUS HO646145 498 bp mRNA linear EST 20-JAN-2012
DEFINITION penium_71836_c52067_c Penium margaritaceum EST library Penium
margaritaceum cDNA 5', mRNA sequence.
ACCESSION HO646145
VERSION HO646145.1
DBLINK BioSample: SAMN00169693
KEYWORDS EST.
SOURCE Penium margaritaceum
ORGANISM Penium margaritaceum
Eukaryota; Viridiplantae; Streptophyta; Zygnematophyceae;
Zygnematophycidae; Desmidiales; Peniaceae; Penium.
REFERENCE 1 (bases 1 to 498)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..498
/organism="Penium margaritaceum"
/mol_type="mRNA"
/strain="SKD-2004, CL-18"
/db_xref="taxon:102169"
/clone_lib="SAMN00169693 Penium margaritaceum EST library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 118 a 128 c 138 g 114 t
ORIGIN
1 tgccttgcga ccctccctcc aaccaacgga gcttgtgcct tcggagcttt tggcgacgcg
61 tcgagatcta cgatcctatt gtaagcagtt gttcccatgg caactttcgg agaagcccct
121 gctggtgatg ttgcttccgg cgcgaagatc ttcaagacga agtgtgccca gtgtcatgtg
181 gctgagaagg gtggcggcca caaacaaggt cccaacctgg gaggcctttt tgggaggcag
241 tccggcacca tagaggggta tgcgtactct gcagccaaca agaacagagc cgtggtttgg
301 acagaggaca ccttgtacga gtaccttttg aatcctaaga agtatattcc tggcacaaag
361 atggtgttcg ccggtctcaa gaagcctcaa gagcgtgcag acctcattgc ctacctaaaa
421 gaggcaaccg catagatggc tcttagttgg agaagatgac ctgcccctct gacaagtagt
481 tcaggcattg ttgacact
//