LOCUS HO641862 463 bp mRNA linear EST 20-JAN-2012
DEFINITION penium_71836_c31751_c Penium margaritaceum EST library Penium
margaritaceum cDNA 5', mRNA sequence.
ACCESSION HO641862
VERSION HO641862.1
DBLINK BioSample: SAMN00169693
KEYWORDS EST.
SOURCE Penium margaritaceum
ORGANISM Penium margaritaceum
Eukaryota; Viridiplantae; Streptophyta; Zygnematophyceae;
Zygnematophycidae; Desmidiales; Peniaceae; Penium.
REFERENCE 1 (bases 1 to 463)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..463
/organism="Penium margaritaceum"
/mol_type="mRNA"
/strain="SKD-2004, CL-18"
/db_xref="taxon:102169"
/clone_lib="SAMN00169693 Penium margaritaceum EST library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 102 a 155 c 137 g 69 t
ORIGIN
1 cgggatctct tccagcccct tggtagcgca gcctcacacc ttccgtccac gacccgaacc
61 ttcggaggta ccagcggatc tgtggaagtg ccttggtagc agtttgcttc tcgtgcacca
121 gagtacccca cagcgcctgt acaatggcgc ccaaagctgt gagcaaggcg gaggcggcca
181 aggcgcaggc ggccaaggct gcgaaggcgg tgaagcgcac gggcaagcgc aaggccatca
241 aagtgcgcac gtccgtcacc ttccaccgcc ccaagacact ggtgaaggcg cgctcgccca
301 agtacccccg catctctgcg ccgcccatgc agaagctcga ccacttccag gtgctgaagt
361 accccctgac gacggagagc gcaatgaaga agattgagga caacaacacg ctggtgttca
421 tcgtggacgt gcgcgccaac aaggcgcaga tccgcagcgc cgt
//