LOCUS HO639840 406 bp mRNA linear EST 20-JAN-2012
DEFINITION penium_71836_c61195_c Penium margaritaceum EST library Penium
margaritaceum cDNA 5', mRNA sequence.
ACCESSION HO639840
VERSION HO639840.1
DBLINK BioSample: SAMN00169693
KEYWORDS EST.
SOURCE Penium margaritaceum
ORGANISM Penium margaritaceum
Eukaryota; Viridiplantae; Streptophyta; Zygnematophyceae;
Zygnematophycidae; Desmidiales; Peniaceae; Penium.
REFERENCE 1 (bases 1 to 406)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..406
/organism="Penium margaritaceum"
/mol_type="mRNA"
/strain="SKD-2004, CL-18"
/db_xref="taxon:102169"
/clone_lib="SAMN00169693 Penium margaritaceum EST library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 65 a 119 c 107 g 115 t
ORIGIN
1 cgggacagcg cttgccctcg tgcctcgttt ccgctcgctg ttacccattg cttccgtttg
61 tcttcgttct caccatggcg gttcttggct tgcgtcgtgc tcttggactt ctcgcgttcg
121 ccttggtgat tctgtgccag catgctactg cacggtttct gggtggaacc aacagcgatg
181 aaactggtca agatgtctcg gctattctgg cacagcctga ccctgcaaag gtggactttc
241 agcctctgaa actgctcttg ggaccggaaa tcatatggca tcagtgcaag gaggtggagg
301 ttcttgggac agtctgcgtg gctgtctaca tagacccgaa cactatgcct tcctctcttc
361 gggttgacat cacgatgcgc aaccgcacct tctcgctccc gttgct
//