LOCUS HO638245 448 bp mRNA linear EST 19-JAN-2012
DEFINITION penium_71836_c12825_c Penium margaritaceum EST library Penium
margaritaceum cDNA 5', mRNA sequence.
ACCESSION HO638245
VERSION HO638245.1
DBLINK BioSample: SAMN00169693
KEYWORDS EST.
SOURCE Penium margaritaceum
ORGANISM Penium margaritaceum
Eukaryota; Viridiplantae; Streptophyta; Zygnematophyceae;
Zygnematophycidae; Desmidiales; Peniaceae; Penium.
REFERENCE 1 (bases 1 to 448)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..448
/organism="Penium margaritaceum"
/mol_type="mRNA"
/strain="SKD-2004, CL-18"
/db_xref="taxon:102169"
/clone_lib="SAMN00169693 Penium margaritaceum EST library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 78 a 142 c 125 g 103 t
ORIGIN
1 tggcatgcgt gggcgcatct ggaacctggt ggctgctgca gtacgttggg cggtgtgttc
61 tgcatttcgt cctcggcaac atgccaccag ctcggctcgt ccatcgctgt catgctcgtg
121 ttctcctact tctgccaagc cgcgtgcggc gcaacattcg gcatcgtgcc cttcatctcc
181 cgccgctccc tcggcatcgt gtcaggcctc accggcgctg gcggcaacgt cggcgcatct
241 atcactcagg ccatattctt cacgtatgca acgtacccag tggaggaggg actcatgtac
301 atgggcatca tgatcatcgc gtgcacggtg cccctcatgt tcatgtggtt ccctcagtgg
361 ggaagcatga tcttccccca ctcacgactc gccctcccgg cgtactgagg aggagtatta
421 cggctcggaa tacaacgaga aagagaag
//