LOCUS HO636172 392 bp mRNA linear EST 19-JAN-2012
DEFINITION penium_71836_c33293_c Penium margaritaceum EST library Penium
margaritaceum cDNA 5', mRNA sequence.
ACCESSION HO636172
VERSION HO636172.1
DBLINK BioSample: SAMN00169693
KEYWORDS EST.
SOURCE Penium margaritaceum
ORGANISM Penium margaritaceum
Eukaryota; Viridiplantae; Streptophyta; Zygnematophyceae;
Zygnematophycidae; Desmidiales; Peniaceae; Penium.
REFERENCE 1 (bases 1 to 392)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..392
/organism="Penium margaritaceum"
/mol_type="mRNA"
/strain="SKD-2004, CL-18"
/db_xref="taxon:102169"
/clone_lib="SAMN00169693 Penium margaritaceum EST library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 90 a 92 c 123 g 87 t
ORIGIN
1 gggaagccgc acaaaggaca acctgttggt gtacaatgtc gcggatgagc tgagctcgtg
61 gctcgctgct gcagctgctg gcgggtaaca gcaagcagct gctggtgggt aacagcaagc
121 agctgctggt gggtaacagc aagcagtagc ggaggcagac agcgtcccca gcgagacttt
181 tcctttttgg tacgacccaa aaagtagtac agcaggaaag aatcatcctg tcctctattt
241 gtcacatcca acgaaagtgg cagatgcttt aatggtgcga gtatgtcgtg cggcagatgt
301 ggagcgttgc cgcttgcgct gcagctgcca ttcctgctgt gggagatgga tgatgaagcg
361 tcgtccagct tacctcctgg tgttcgtaaa ag
//