LOCUS HO633028 436 bp mRNA linear EST 19-JAN-2012
DEFINITION penium_71836_c54376_c Penium margaritaceum EST library Penium
margaritaceum cDNA 5', mRNA sequence.
ACCESSION HO633028
VERSION HO633028.1
DBLINK BioSample: SAMN00169693
KEYWORDS EST.
SOURCE Penium margaritaceum
ORGANISM Penium margaritaceum
Eukaryota; Viridiplantae; Streptophyta; Zygnematophyceae;
Zygnematophycidae; Desmidiales; Peniaceae; Penium.
REFERENCE 1 (bases 1 to 436)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..436
/organism="Penium margaritaceum"
/mol_type="mRNA"
/strain="SKD-2004, CL-18"
/db_xref="taxon:102169"
/clone_lib="SAMN00169693 Penium margaritaceum EST library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 104 a 127 c 126 g 79 t
ORIGIN
1 catgaagctg tgggccgtgg acgaggtgcg cgccaagagc aagttctggt actttctgag
61 gaagctgcgg cgggtgaaga aggccaatgg ccagatcctc gccatcaatg agatttttga
121 gaagaacccc gacggtgatc aagaacttcg gcatctggct gcgctaccag tcacgcacgg
181 gctatgccaa catgtacaag gagtacccgg gacaccacgc tcaacggtgc cgtcgagcag
241 atgtatgacg agatggcctc gcgtcaccgc gtccgtttcc cctgcatcca gattatcaag
301 acggcggttc tggagaacga gcagtgcaag cgcgacaaca cgctgcagtt ccacacggta
361 gaagctgcgc ttccctctgc cattcaagaa gatccgcgca tcatcgcgtg tgcgccgcac
421 cacattcaag gccaag
//