LOCUS HO621524 528 bp mRNA linear EST 19-JAN-2012
DEFINITION penium_71836_c70050_c Penium margaritaceum EST library Penium
margaritaceum cDNA 5', mRNA sequence.
ACCESSION HO621524
VERSION HO621524.1
DBLINK BioSample: SAMN00169693
KEYWORDS EST.
SOURCE Penium margaritaceum
ORGANISM Penium margaritaceum
Eukaryota; Viridiplantae; Streptophyta; Zygnematophyceae;
Zygnematophycidae; Desmidiales; Peniaceae; Penium.
REFERENCE 1 (bases 1 to 528)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..528
/organism="Penium margaritaceum"
/mol_type="mRNA"
/strain="SKD-2004, CL-18"
/db_xref="taxon:102169"
/clone_lib="SAMN00169693 Penium margaritaceum EST library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 103 a 161 c 171 g 91 t
ORIGIN
1 aggcgggcga caaggtgggc tcgtccgagg cggcactgct gtccaagctc aacatccgcc
61 ccttctcgta cggcctcatc gtcagccagg tgtatgagga cggcagcacg ttccacccgt
121 cggtgctgga catgagcgag gacgacctcg tcgccaagtt catgaccggc gtgagccagg
181 tggcggcgct ctcgctcgcc ctcaactacc ccaccatcgc gtccgtgccg cactcgttcg
241 tcaacgcgta caagaacgtc gtggccgtcg tgctgggtct tgacggcgag ttctccttcc
301 ctcaggccga caagatcaag gagatccttg cggatcccac gcgcttcctg gtggctgccg
361 cgcctgctgc tgacgctgga ggtgctgcag cagctgagga ggccaagcct gcaaaggagg
421 aggaggaaag grrggaaagg aggaggagga cgatgacatg ggcttcagcc tcttcgacta
481 ggcggaagga gcatgaccta gcccgcatgg tgaacatcct gaaaatgc
//