LOCUS HO618369 471 bp mRNA linear EST 20-JAN-2012
DEFINITION penium_71836_c52465_c Penium margaritaceum EST library Penium
margaritaceum cDNA 5', mRNA sequence.
ACCESSION HO618369
VERSION HO618369.1
DBLINK BioSample: SAMN00169693
KEYWORDS EST.
SOURCE Penium margaritaceum
ORGANISM Penium margaritaceum
Eukaryota; Viridiplantae; Streptophyta; Zygnematophyceae;
Zygnematophycidae; Desmidiales; Peniaceae; Penium.
REFERENCE 1 (bases 1 to 471)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..471
/organism="Penium margaritaceum"
/mol_type="mRNA"
/strain="SKD-2004, CL-18"
/db_xref="taxon:102169"
/clone_lib="SAMN00169693 Penium margaritaceum EST library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 93 a 132 c 159 g 86 t
ORIGIN
1 agacagcaag ttcaacaagg tggtgctcaa gcgcctcttc tatgagccgc accaaccgcc
61 cgccgctctc cctctccccg cctcctcaag ttcatggagg gaaaaggatg accaagtggc
121 ggtggtggtg ggcgcagtga cggacgacac gcggctgtac gaggtgccgg cgggcgtgaa
181 ggtgtgtgcg ctgcgttttt acggagacgg cacgtgctcg catcgtcaag gcgggtggcg
241 agtgcctcac gttcgaccag ctggctctgc agaagcctac cggtgccaac tgcgtgctgc
301 tgcgtggtgc aaagaacgca cgtgaggcag tgaagcactt tggcagggcg cctggtgtgc
361 cgcacagcca caccmaagcc cgtatgtgcg ctccaagggt cgcaagtttg agaaggctcg
421 tggtaggaga aagagccgtg gcttcaaggc ctaaagagct tctgagctcg t
//