LOCUS HO614573 471 bp mRNA linear EST 20-JAN-2012
DEFINITION penium_71836_c53549_c Penium margaritaceum EST library Penium
margaritaceum cDNA 5', mRNA sequence.
ACCESSION HO614573
VERSION HO614573.1
DBLINK BioSample: SAMN00169693
KEYWORDS EST.
SOURCE Penium margaritaceum
ORGANISM Penium margaritaceum
Eukaryota; Viridiplantae; Streptophyta; Zygnematophyceae;
Zygnematophycidae; Desmidiales; Peniaceae; Penium.
REFERENCE 1 (bases 1 to 471)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..471
/organism="Penium margaritaceum"
/mol_type="mRNA"
/strain="SKD-2004, CL-18"
/db_xref="taxon:102169"
/clone_lib="SAMN00169693 Penium margaritaceum EST library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 104 a 142 c 128 g 97 t
ORIGIN
1 tgcctagatt tgtaggtcgg acgaacttct aagcaatttc cttctccgtg aagcagtgca
61 gcaggccaca ggtggacttc ggtagccccg gagcagttgc actcgcccga cctttcccag
121 ggagcccgcc agctcgtgct tcaaccgtcc agtcaaaatg tcgctgatga tcaacgatgg
181 gtttcagcac attctgcgtg tgctgaacac caatgttgac ggccgcaaca agatcatgta
241 cgccctcacc tccatcaagg gtatcggccg ccgctttgcc aacctcgtgt gcaagaaggc
301 tgacgtcgac ctgaacaagc gggcaggtga gctgtcggcg gccgagctcg agaacctgat
361 ggtgatcgtt ggcaaccccc ggcagttcaa gatccccgac tggttcctca acagacaaaa
421 ggaccataag gacggccgct tctctcagat tgtctctaac ggcctggagg c
//