LOCUS HO608236 315 bp mRNA linear EST 20-JAN-2012
DEFINITION penium_71836_c29464_c Penium margaritaceum EST library Penium
margaritaceum cDNA 5', mRNA sequence.
ACCESSION HO608236
VERSION HO608236.1
DBLINK BioSample: SAMN00169693
KEYWORDS EST.
SOURCE Penium margaritaceum
ORGANISM Penium margaritaceum
Eukaryota; Viridiplantae; Streptophyta; Zygnematophyceae;
Zygnematophycidae; Desmidiales; Peniaceae; Penium.
REFERENCE 1 (bases 1 to 315)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..315
/organism="Penium margaritaceum"
/mol_type="mRNA"
/strain="SKD-2004, CL-18"
/db_xref="taxon:102169"
/clone_lib="SAMN00169693 Penium margaritaceum EST library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 88 a 74 c 96 g 57 t
ORIGIN
1 cacagccaag ggaaactctt ccaaaaggaa accagcaagt tggcacactc ttcccagacg
61 tggcaagttt tcaaagccac actagttgga gagtacatgt gcaagttgac ggcatgactg
121 gaaggcagtc cagatgggaa tacggaggga gacggtgtgg tggtgggcac gaatgcaacc
181 tcattgatgc acgaacgggt agtcactcaa gctggtgatg cacctcgacc aggctacagt
241 gcggggtgtg atgtcgtaac ctcactacgt ggaagaaagg acgaaggctc tccgggacgg
301 caacattgca catgc
//