LOCUS HO607693 605 bp mRNA linear EST 20-JAN-2012
DEFINITION penium_71836_c10813_c Penium margaritaceum EST library Penium
margaritaceum cDNA 5', mRNA sequence.
ACCESSION HO607693
VERSION HO607693.1
DBLINK BioSample: SAMN00169693
KEYWORDS EST.
SOURCE Penium margaritaceum
ORGANISM Penium margaritaceum
Eukaryota; Viridiplantae; Streptophyta; Zygnematophyceae;
Zygnematophycidae; Desmidiales; Peniaceae; Penium.
REFERENCE 1 (bases 1 to 605)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..605
/organism="Penium margaritaceum"
/mol_type="mRNA"
/strain="SKD-2004, CL-18"
/db_xref="taxon:102169"
/clone_lib="SAMN00169693 Penium margaritaceum EST library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 172 a 124 c 180 g 129 t
ORIGIN
1 cgggacctag gcacccagag acgaagaagg gcgtagtaat cgacgaaatg cttcggggag
61 ctgagaacaa gcattgatcc ggagatgccc gaatagggga acctatttaa ctgcctactg
121 aatcaatagg taggcaagag acaacctggc gaactgaaac atcttagtag ccagaggaaa
181 agaaagcaaa agcgattccc tgagtagtgg cgagcgaaat gggaacagcc taaaccgcga
241 aagcggggtg tgggagagca cacgtggcat gtggctttgg aagtctgcgt gtggaagagc
301 ggtttgaaag tcttgtacca cgttgggagc tttttcacgt gtagcaatgc acgtcaggaa
361 gtgagagtga gggtcgatgc acaccgaaga atcgcaccgg gctttctgct gacagaccgt
421 gcagccatgt gagatggcac gaagtaaaaa tgtaaaagaa atcgcgcttt gctctttggt
481 cagctaagtg ccatctgacc aatttctatg agtgcactgg attgttgacc gaggactttt
541 gcttctcgta gcagatccta gtgagtggag tgtttgcatt cagaccaaca gaccatcatt
601 agctg
//