LOCUS HO604276 505 bp mRNA linear EST 20-JAN-2012
DEFINITION penium_71836_c35383_c Penium margaritaceum EST library Penium
margaritaceum cDNA 5', mRNA sequence.
ACCESSION HO604276
VERSION HO604276.1
DBLINK BioSample: SAMN00169693
KEYWORDS EST.
SOURCE Penium margaritaceum
ORGANISM Penium margaritaceum
Eukaryota; Viridiplantae; Streptophyta; Zygnematophyceae;
Zygnematophycidae; Desmidiales; Peniaceae; Penium.
REFERENCE 1 (bases 1 to 505)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..505
/organism="Penium margaritaceum"
/mol_type="mRNA"
/strain="SKD-2004, CL-18"
/db_xref="taxon:102169"
/clone_lib="SAMN00169693 Penium margaritaceum EST library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 113 a 113 c 136 g 143 t
ORIGIN
1 acatagtaag gattgacaga ttgagagctc tttcttgatt ctatgggtgg tggtgcatgg
61 ccgttcttag ttggtggagt gatttgtctg gttaattccg ttaacgaacg agacctcagc
121 ctgctaaata gttacgcgaa cattcgtgtt cgcggccaac ttcttagagg gactatcggc
181 gtttagccgg ctggaagttt gaggcaataa caggtctgtg atgcccttag atgttctggg
241 ccgcacgcgc gctacactga tgaattcaac gagctcactc ctggatcgaa aggtttagga
301 aacctctgaa atttcatcgt gatggggata aattattgca attattaatc ttcaacgagg
361 aatacctagt aagcgcgagt catcagctcg cgttgattac gtccctgccc tttgtacaca
421 ccgcccgtcg ctcctaccga ttgaatgatc cggtgaagtt ttcggattgc ggcgacgctg
481 acggttcgcc gtcggcgacg ttgtg
//