LOCUS HO602524 652 bp mRNA linear EST 19-JAN-2012
DEFINITION penium_71836_c11640_c Penium margaritaceum EST library Penium
margaritaceum cDNA 5', mRNA sequence.
ACCESSION HO602524
VERSION HO602524.1
DBLINK BioSample: SAMN00169693
KEYWORDS EST.
SOURCE Penium margaritaceum
ORGANISM Penium margaritaceum
Eukaryota; Viridiplantae; Streptophyta; Zygnematophyceae;
Zygnematophycidae; Desmidiales; Peniaceae; Penium.
REFERENCE 1 (bases 1 to 652)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..652
/organism="Penium margaritaceum"
/mol_type="mRNA"
/strain="SKD-2004, CL-18"
/db_xref="taxon:102169"
/clone_lib="SAMN00169693 Penium margaritaceum EST library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 131 a 189 c 223 g 108 t
ORIGIN
1 gcagcagctg tcgctgctgc ggcagcaacc cggctgctgg ggctcagggc gggggcgaac
61 gtgcgggagg ccagaaccgt ggcttgctgg gaggcaggag agggtgtgat gggagtgaag
121 tcgtcctggt cgtgcagccg ctcaaggaga gtggccgagg gaaagagtga gaagaggaag
181 gagcggaagc tggggatgcg ttcgggggcg atcgacacgg tgagtgtgta ggcggagccg
241 tagcgcgcct tgagcgtttg gggggacccg aggcatttga gcttgcctcc aactaggatg
301 cctacccgag ttccgagcgc ctccgcatcc tccaccgact gcgtgcaaat gagagtggcg
361 cgttggcccg actccgcctg caccttgttc cacacgtctc tccggctctt cacgtccaac
421 ccttggcatg gctcgtccag aagcaagacg gaaggacctc caagaagagc gacagccaca
481 ctcactttac gaaccaccgc cggcctacag ttatgcagct gaayatcggc gtccgcagtg
541 aggtgaaggg agtccatgag tgcatgcacg acggtggcca cgggctcaag cacgcctttc
601 acatgggcca tcacctccag atgctcccgc accgtcaggt acccatacac gg
//