LOCUS HO601303 491 bp mRNA linear EST 20-JAN-2012
DEFINITION penium_71836_c56612_c Penium margaritaceum EST library Penium
margaritaceum cDNA 5', mRNA sequence.
ACCESSION HO601303
VERSION HO601303.1
DBLINK BioSample: SAMN00169693
KEYWORDS EST.
SOURCE Penium margaritaceum
ORGANISM Penium margaritaceum
Eukaryota; Viridiplantae; Streptophyta; Zygnematophyceae;
Zygnematophycidae; Desmidiales; Peniaceae; Penium.
REFERENCE 1 (bases 1 to 491)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..491
/organism="Penium margaritaceum"
/mol_type="mRNA"
/strain="SKD-2004, CL-18"
/db_xref="taxon:102169"
/clone_lib="SAMN00169693 Penium margaritaceum EST library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 110 a 137 c 145 g 99 t
ORIGIN
1 cttgcttcgt ttccgagctg tcacaaactt cgccaccatg gttctctcaa acgacattga
61 cctgctccac ccgccggccg agtatgagaa gcgcaagcac aagttgaaac ggctggtgca
121 gtcaccgaac tcgttcttca tggacgtgaa gtgccagggc tgcttcaaca tcacgaccgt
181 gttctcacac tcgcagactg ttgtgctgtg cggaagctgc tccaccgtgc tgtgccagcc
241 cacgggcggc aaggcaaggc ttaccgaggg ctgctctttc cggaagaagg gagattgagt
301 gagaggaagg cactggacca ccaagcctgt gcaatggcag tttttctcct agtgtgagtg
361 agaagaggag gggctgtatt gggtcaagag aaggataggc gtgggagcat cagccgacac
421 caccccaacc aagccagcct tctccagcat ggggaggcag gaccagtgtt gggccacttg
481 ttcatcccag c
//