LOCUS HO595161 435 bp mRNA linear EST 19-JAN-2012
DEFINITION penium_71836_c39859_c Penium margaritaceum EST library Penium
margaritaceum cDNA 5', mRNA sequence.
ACCESSION HO595161
VERSION HO595161.1
DBLINK BioSample: SAMN00169693
KEYWORDS EST.
SOURCE Penium margaritaceum
ORGANISM Penium margaritaceum
Eukaryota; Viridiplantae; Streptophyta; Zygnematophyceae;
Zygnematophycidae; Desmidiales; Peniaceae; Penium.
REFERENCE 1 (bases 1 to 435)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..435
/organism="Penium margaritaceum"
/mol_type="mRNA"
/strain="SKD-2004, CL-18"
/db_xref="taxon:102169"
/clone_lib="SAMN00169693 Penium margaritaceum EST library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 79 a 123 c 120 g 113 t
ORIGIN
1 aagtcctcca cgcagatgat gccgtgcttt ccaagaacct tctcgacgat ggcgttgtca
61 gtgagggcga tgcgctgctt gtccaccttg ccgtagccac gcttgtagat gagctcgcgg
121 atgctcttca tgttggggta gccgtacgtg acgtagggtt cgaccttgtg cagcatgttc
181 agcgtcgcct tgttcacctt catgaacaca ccgttgaaaa tctgcctcaa ccgcagcagc
241 tgaagaatct tcctcgtctt cgggtgcatg tcgttgatac cgcggatacg gatgacgaag
301 agcagcttag cctcaggctc gacgtagaaa gccgccattg agcttggcct cgcgcttcag
361 ccggactgag gtcgtttctt ccttgctgcc ggtacgtcct tcgatgtact gctctgcgcg
421 cttgaagatg acctt
//