LOCUS HO587296 515 bp mRNA linear EST 20-JAN-2012
DEFINITION penium_71836_c53034_c Penium margaritaceum EST library Penium
margaritaceum cDNA 5', mRNA sequence.
ACCESSION HO587296
VERSION HO587296.1
DBLINK BioSample: SAMN00169693
KEYWORDS EST.
SOURCE Penium margaritaceum
ORGANISM Penium margaritaceum
Eukaryota; Viridiplantae; Streptophyta; Zygnematophyceae;
Zygnematophycidae; Desmidiales; Peniaceae; Penium.
REFERENCE 1 (bases 1 to 515)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..515
/organism="Penium margaritaceum"
/mol_type="mRNA"
/strain="SKD-2004, CL-18"
/db_xref="taxon:102169"
/clone_lib="SAMN00169693 Penium margaritaceum EST library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 128 a 139 c 151 g 97 t
ORIGIN
1 gcggaagctt ccctgaagga gagtggcaag gacgtgaagg ctgcgctgga caagcttgag
61 tctcagccca agcctcccag agtactgccc acggcgcaag ccctggcagc caaggacaag
121 gagcgtgcag acaaagcgct gcagaagcac actgtggcgg tggaggcgta cgacaagtcg
181 ctgccgccga aagagattga tgcccgcacg tcgcccatca cggcgcgtct ggtggcgctc
241 aagtccgaga ttaaggagct cttgctcggc attgaagagt gaagccttga agagtcgggt
301 gccattcagg gcaacatggg tggcagaaaa cggttggcct cagtcgtaag agagaaacag
361 gtgacattga gcagaactta cgggaacaac acatgcatga accaaagttc gccacctttc
421 ccctttgttc caacctctga aaccggaggc caccctagac tccctgctca atccttgtgt
481 tgtcatgtag tgaactcttt agtgttgact cgtca
//