LOCUS HO586754 504 bp mRNA linear EST 19-JAN-2012
DEFINITION penium_71836_c31081_c Penium margaritaceum EST library Penium
margaritaceum cDNA 5', mRNA sequence.
ACCESSION HO586754
VERSION HO586754.1
DBLINK BioSample: SAMN00169693
KEYWORDS EST.
SOURCE Penium margaritaceum
ORGANISM Penium margaritaceum
Eukaryota; Viridiplantae; Streptophyta; Zygnematophyceae;
Zygnematophycidae; Desmidiales; Peniaceae; Penium.
REFERENCE 1 (bases 1 to 504)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..504
/organism="Penium margaritaceum"
/mol_type="mRNA"
/strain="SKD-2004, CL-18"
/db_xref="taxon:102169"
/clone_lib="SAMN00169693 Penium margaritaceum EST library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 98 a 167 c 162 g 75 t
ORIGIN
1 taggcggcca agaaggttca gctgcgcaag aagggcggcc cgtccatcaa ctacgagtcg
61 ttctacgaga ttggggacgg tgctcaagct gtccaaggcg acgtcgctgt ccaagtgctg
121 caacgagtgc cgcaaaacgg aacggctgct gggtggtacc agtacttcga cgccgagtcc
181 aggacgggcc gscycacccc cgccggcttc cagaagggct accgctgcta cctcctcagt
241 ggtgggcgcg acaagtcgga cgagcccacc cgcggtgcgc ctcgcagcgg cacgcacacg
301 gcgcaggtgc agacgggcga cgcatacagc cccaagtaca acccaagctg ggtgggcggc
361 ctgtgcaacg gcaacggcag cgtggttgac gacccgcact tcacggcgcc tcgggcaccc
421 ccttcgactt caacggcgag ctggacaggt cgttttgcct gaccaccgac gcgcggcttc
481 acatcaacgt gctgctgaat ggct
//