LOCUS HO577710 473 bp mRNA linear EST 20-JAN-2012
DEFINITION penium_71836_c51127_c Penium margaritaceum EST library Penium
margaritaceum cDNA 5', mRNA sequence.
ACCESSION HO577710
VERSION HO577710.1
DBLINK BioSample: SAMN00169693
KEYWORDS EST.
SOURCE Penium margaritaceum
ORGANISM Penium margaritaceum
Eukaryota; Viridiplantae; Streptophyta; Zygnematophyceae;
Zygnematophycidae; Desmidiales; Peniaceae; Penium.
REFERENCE 1 (bases 1 to 473)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..473
/organism="Penium margaritaceum"
/mol_type="mRNA"
/strain="SKD-2004, CL-18"
/db_xref="taxon:102169"
/clone_lib="SAMN00169693 Penium margaritaceum EST library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 128 a 134 c 138 g 70 t
ORIGIN
1 agcaacagtt gcagggcctt agtcgcaaaa agggagatcg gccgtttgaa tcacgccctt
61 gtcacaatct ggtcaacacc cgaacatcga catggcgaag atgaaggtcc acgagctccg
121 taccaagggc aagggcgagc tggtgaacca gcttaaggag ttgaagacag agctggctgc
181 tcttcgggtg gcgaaggtga ctggtggtgc gccaaacaag ctctctaaaa atcaaggtgg
241 tgcgcaagtc gatagcgcag gtactgacgg tgatcaacca gacgcagaag gccaaccctg
301 cgcgaggcgt tctccaagaa gaagtacatg ccgctcgacc tcaggcccca agaagaccgc
361 gtgccatccg caacgcgcct caccccacgc cacggcctcc attgaagacg gagaagcaga
421 ggaagcgcga gctctactac cccaacgcgc aagtatgccg tgaaggcyka gam
//