LOCUS HO574495 945 bp mRNA linear EST 19-JAN-2012
DEFINITION nitella_74953_c39390_c Nitella hyalina EST library Nitella hyalina
cDNA 5', mRNA sequence.
ACCESSION HO574495
VERSION HO574495.1
DBLINK BioSample: SAMN00169692
KEYWORDS EST.
SOURCE Nitella hyalina
ORGANISM Nitella hyalina
Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
Characeae; Nitella.
REFERENCE 1 (bases 1 to 945)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..945
/organism="Nitella hyalina"
/mol_type="mRNA"
/strain="KGK0190"
/db_xref="taxon:181804"
/clone_lib="SAMN00169692 Nitella hyalina EST library"
/dev_stage="all stages"
/note="Culture harvested from various time points during
the day and across the life cycle."
BASE COUNT 220 a 199 c 265 g 260 t
ORIGIN
1 cgggacatcc ctcctattga cggtgtaacg ctctaccggc tcagcaatca tggcggatgt
61 cgcagcagaa ggggccgggg cccagcagcc gaagaagcgt acgtttaaga agttttccta
121 tcgaggcgtc gatctcgatg ccctccttga catgagcaca gatgagctcg ttgtgctttt
181 ccatgcgcgg gcgcgaagaa ggttccagcg cggtttgaag agaaagccgt tggcgcttat
241 caagaagctc cgtaaggcga ggcgtgaggc acctgctgga gagaagccgg agccagtgag
301 aacccatctg agaacatgat cattgttccg gagatgattg gaaccgtgat tggtgtttac
361 aacggaaaaa cattcaatca ggtcgaaatc aagcccgaga tgattggcca ctacctcggg
421 ggagttttcc attacgtaca agccagtcaa gcacggaagg cccggtattg gtgcaactca
481 ctctttctag gttctattcc tttgaagtga gacttcattt ggagctggtt rcgatacgac
541 gacgggtttt acgcggctat ttcttgcctg agctcgacat tgtgaaggat gcagatgcgt
601 tagtcttgca gttggagggt tgtttgttcc ttatgttgtg cagtggaact gctttctcga
661 ggcaaattaa ggttgatctg tgcattcaat tttttttgct ttttcgaact ccttgaaact
721 gggaggatct gagtgctgtc gaatgctgtc gcgtttgctt tgcgtcttgg aaactctctc
781 gagtgcatga agtgaaagct gtctccatca ggagtgcatg catgatggaa aagatatatc
841 cggcacccaa ttgtccaaag tcttaataca gtatcgtgag tggtattagt atttttgtgg
901 gctatgacag ctggaggtat gcagtaatat taaatgtcat tgtcg
//