LOCUS HO573128 725 bp mRNA linear EST 19-JAN-2012
DEFINITION nitella_74953_c13695_c Nitella hyalina EST library Nitella hyalina
cDNA 5', mRNA sequence.
ACCESSION HO573128
VERSION HO573128.1
DBLINK BioSample: SAMN00169692
KEYWORDS EST.
SOURCE Nitella hyalina
ORGANISM Nitella hyalina
Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
Characeae; Nitella.
REFERENCE 1 (bases 1 to 725)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..725
/organism="Nitella hyalina"
/mol_type="mRNA"
/strain="KGK0190"
/db_xref="taxon:181804"
/clone_lib="SAMN00169692 Nitella hyalina EST library"
/dev_stage="all stages"
/note="Culture harvested from various time points during
the day and across the life cycle."
BASE COUNT 194 a 119 c 157 g 250 t
ORIGIN
1 gtttttgcaa tatatattat atactcttaa gactttttta actcgctatt aagatcttaa
61 gtacagagtg gcatcaattt tttggggcgt caaccgaaat gtgagctgac atttgatgta
121 gtcgatgatt gaattatcac attaartkmm ckggatgtct attcggcgct ctttgtaaaa
181 acgtgttagg agtcctagga gtccaggaca ctggcagttt aatacgattt gttgaggatt
241 gatgactgtg cgtcgtcatc ccttagtgac atatagcctc tgcttttcac aactacacac
301 aattttgtta gagtccctga gacttcaata atttggcaaa ctcttaatgc tcggtgcaaa
361 agcgcacatt gtcaatgcta cagaccgcat gcaattcggg attaattcgg gattgggatc
421 gactgttttt aaattttgat ggtcctcagc cattggttgt tctctcttga gggtttttgt
481 tgttgcttta tatacttttg tttccttttt ttctggcttt tggtctcaaa ggcaatgagt
541 tgagacctgt acaatgaatg tgatagtgat tgacgagacc gtaaagaatg gaggagattt
601 gtgacacaga gaaactctac ggattttgga gatgaaagaa gtgatgatga cagttttgta
661 ttaatacgaa gtgcaatata tgctttttga aatccaaact tgacgagcta cttcgaaact
721 tttca
//