LOCUS HO558443 486 bp mRNA linear EST 19-JAN-2012
DEFINITION nitella_74953_c60068_c Nitella hyalina EST library Nitella hyalina
cDNA 5', mRNA sequence.
ACCESSION HO558443
VERSION HO558443.1
DBLINK BioSample: SAMN00169692
KEYWORDS EST.
SOURCE Nitella hyalina
ORGANISM Nitella hyalina
Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
Characeae; Nitella.
REFERENCE 1 (bases 1 to 486)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..486
/organism="Nitella hyalina"
/mol_type="mRNA"
/strain="KGK0190"
/db_xref="taxon:181804"
/clone_lib="SAMN00169692 Nitella hyalina EST library"
/dev_stage="all stages"
/note="Culture harvested from various time points during
the day and across the life cycle."
BASE COUNT 136 a 119 c 114 g 117 t
ORIGIN
1 aaagactact atggcaaaga ctactatggc aaagactact atgacaaaga cggctacggt
61 aaggacggtt acgattacgg ctacaacaaa tagggcaagg tttatcgatt tcaggtctga
121 acacaagtct tctgactggt gctgatcgca accctccagg attccaggaa actcgctgcc
181 accatccccg agccacaagg cgtcccttca cttacttgca aagggcttga ccatgatcat
241 gtgcagggca ccaatagtcg attgtcggca gccgggctgg cgtggaagtg agagcttccc
301 ctctcagtcc tctaaggatc caaggcaccg tttgcacttc gaagtcaggg tggcacgatg
361 tttaccttag ggctgtagtg ctctaaatgt tgtcaaaaga ttcaaaacct tgaaatgttt
421 tacgattttg ataaccttga aatgtcaaga ctcaagacct tgcaagacat gtactgtcag
481 ctcaca
//