LOCUS HO549200 588 bp mRNA linear EST 19-JAN-2012
DEFINITION nitella_74953_c12218_c Nitella hyalina EST library Nitella hyalina
cDNA 5', mRNA sequence.
ACCESSION HO549200
VERSION HO549200.1
DBLINK BioSample: SAMN00169692
KEYWORDS EST.
SOURCE Nitella hyalina
ORGANISM Nitella hyalina
Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
Characeae; Nitella.
REFERENCE 1 (bases 1 to 588)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..588
/organism="Nitella hyalina"
/mol_type="mRNA"
/strain="KGK0190"
/db_xref="taxon:181804"
/clone_lib="SAMN00169692 Nitella hyalina EST library"
/dev_stage="all stages"
/note="Culture harvested from various time points during
the day and across the life cycle."
BASE COUNT 154 a 132 c 140 g 162 t
ORIGIN
1 catatgatca ttataacttt tgctgatgta cttgggagct gtgcggtacc ttcctttagc
61 tgtcaggtgt ggcgccaagc ctggttgctt gaacaagagt tgcaccgact caagagtagc
121 attgactcta tagtactgca cgtcatgcag ggcctgttct tgggccaacc gtaggtgctt
181 ctgcttggca ggcgagcaac agactcatat tcagtagtaa ctgcatgtgt ttgaatcgaa
241 ccaggtattg aatggatgct gtcttgcttc agaacttgaa tgtaagtttc gtttgcctgc
301 tttacacttc ccagcactgt ggtgtcagtg atcacatcat catcatcatc atcgttatca
361 gcagcagcag cagcaggagc ggcaacatgc tgaaggactc gtgagtcgcc attgcatcgg
421 tgtggcatac aagttgactg cgctgtcaac tcagaaaggg aaagcttgaa aaccagcaaa
481 ccatgtttaa catggggttt gcttttatat cagactttat cagaccccaa atctcaaaga
541 atacttgtaa gcatcgcgaa gaatactgac accaaacgat aagtttgc
//