LOCUS HO542330 494 bp mRNA linear EST 19-JAN-2012
DEFINITION nitella_74953_c41754_c Nitella hyalina EST library Nitella hyalina
cDNA 5', mRNA sequence.
ACCESSION HO542330
VERSION HO542330.1
DBLINK BioSample: SAMN00169692
KEYWORDS EST.
SOURCE Nitella hyalina
ORGANISM Nitella hyalina
Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
Characeae; Nitella.
REFERENCE 1 (bases 1 to 494)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..494
/organism="Nitella hyalina"
/mol_type="mRNA"
/strain="KGK0190"
/db_xref="taxon:181804"
/clone_lib="SAMN00169692 Nitella hyalina EST library"
/dev_stage="all stages"
/note="Culture harvested from various time points during
the day and across the life cycle."
BASE COUNT 121 a 109 c 161 g 100 t
ORIGIN
1 actgtsygsg atagagaaga aagttgtttg agaggggatt ctgagggtgc ttgagaaaaa
61 aagagccact gttagctgcg gcacgaacac agagcgatgg ccaccacatg tatgtcagtg
121 gccgggttat cttacggtgt tgcagctgcc aagcaagccg aatgtgctgt ttcgccctgc
181 agcaccagct acgcgattag tgcacctgtc ggactgggtg cctctctgcc tagccgccgc
241 cttcagggaa tacgaggcgc agcaggagta ggagggaatg gtacagtggt gactggattt
301 cggcaaaaca cgacgcagat gtcacgtgga caaacgacga ggaggttttg cgcgtgccgg
361 agcaggtaag cgtcattgag ccggatctag aggaggagcc tcgggaccga atgggcaaca
421 ctcggtaacg ggcaagtcaa gatcttttcg attatggtca ctgggatggc catcacactt
481 ggcatgaagg tgat
//